RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ABCG8Q9H221 673 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 ERVMER34-1Q9H9K5 563 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 PARD6AQ9NPB6 346 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CHRAC1Q9NRG0 131 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 IL17CQ9P0M4 197 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 SAMD15Q9P1V8 674 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 ZC3H7BQ9UGR2 993 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 APPL1Q9UKG1 709 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 OR1A2Q9Y585 309 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 A0A087WUV0 522 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 MAGEB16A2A368 324 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 FOXO6A8MYZ6 492 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 HOXC4P09017 264 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 GSTA2P09210 222 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 BPIP17213 487 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ITGALP20701 1170 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ADRA1DP25100 572 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 NMBRP28336 390 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 CCT8P50990 548 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 BLKP51451 505 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF140P52738 457 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 CDK3Q00526 305 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.687e-8■■■■■ 35.3
SHMT2-218ENST00000555213 SKIDA1Q1XH10 827 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 INAVAQ3KP66 663 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ANKRD20A4Q4UJ75 823 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 HENMT1Q5T8I9 393 aaKnown RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 PHYKPLQ8IUZ5 450 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 MINDY1Q8N5J2 469 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 PLA2G15Q8NCC3 412 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 OR4K2Q8NGD2 314 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 DTX3LQ8TDB6 740 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 PEX13Q92968 403 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 TLCD1Q96CP7 247 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 EID2BQ96D98 161 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 CFAP36Q96G28 342 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 HIC2Q96JB3 615 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 WDR92Q96MX6 357 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 RANBP9Q96S59 729 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 APOOQ9BUR5 198 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 ACSS3Q9H6R3 686 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 VPS37BQ9H9H4 285 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 GPR27Q9NS67 375 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 OGFRQ9NZT2 677 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 KLQ9UEF7 1012 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 SOX13Q9UN79 622 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 TCAF1Q9Y4C2 921 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 SNX11Q9Y5W9 270 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 MAD1L1Q9Y6D9 718 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 FAM169AQ9Y6X4 670 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 EP300Q09472 2414 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-218ENST00000555213 PLXNA2O75051 1894 aa10.83□□□□□ -0.68
SHMT2-218ENST00000555213 SPTY2D1-AS1A0A0U1RR47 76 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FAM237BA0A1B0GVD1 139 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MROH6A6NGR9 719 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FAM159BA6NKW6 160 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 K7ESM1 405 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 RASGRF2O14827 1237 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 LDB2O43679 373 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 BUD23O43709 281 aaKnown RBP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 OPA1O60313 960 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 UGT1A9O60656 530 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 PRAMEF1O95521 474 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 PGAM1P18669 254 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 PSMA3P25788 255 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 TRIM23P36406 574 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 SLCO1A2P46721 670 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 ARHGAP8P85298 464 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FRG1Q14331 258 aaKnown RBP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 RASA2Q15283 850 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 HLA-BQ31612 363 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 KBTBD12Q3ZCT8 623 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 PCID2Q5JVF3 399 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 CASC4Q6P4E1 433 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FAM151BQ6UXP7 276 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 RFLNAQ6ZTI6 216 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MTERF4Q7Z6M4 381 aaKnown RBP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 TDRPQ86YL5 185 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 GPR26Q8NDV2 337 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MZB1Q8WU39 189 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 STYXQ8WUJ0 223 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 DCAKDQ8WVC6 231 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 ULK4Q96C45 1275 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MFSD3Q96ES6 412 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 PGM2Q96G03 612 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 ELF4Q99607 663 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 TEX101Q9BY14 249 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 SLC13A1Q9BZW2 595 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 ZCCHC2Q9C0B9 1178 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms