RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CXCR3P49682 368 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 C1orf94Q6P1W5 598 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 METTL3Q86U44 580 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TXNRD3Q86VQ6 643 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF557Q8N988 423 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 HPS1Q92902 700 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DIRAS2Q96HU8 199 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLC5A7Q9GZV3 580 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ABCC13Q9NSE7 274 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CPED1A4D0V7 1026 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 BCKDKO14874 412 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 STATHP02808 62 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ITIH1P19827 911 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MAZP56270 477 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLC34A1Q06495 639 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TTYH1Q9H313 450 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 OSGEPQ9NPF4 335 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 PTPRZ1P23471 2315 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MLYCDO95822 493 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 UGT2B4P06133 528 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 LAMP2P13473 410 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MIPP30301 263 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 C15orf59Q2T9L4 293 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ARSHQ5FYA8 562 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CXCL17Q6UXB2 119 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLCO6A1Q86UG4 719 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GRHL3Q8TE85 626 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ATPIF1Q9UII2 106 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 RTTNQ86VV8 2226 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 B3GALT2O43825 422 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 OTCP00480 354 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ADCYAP1R1P41586 468 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 RANBP3LQ86VV4 465 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SGMS1Q86VZ5 419 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MCOLN2Q8IZK6 566 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 APBB2Q92870 758 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLC7A6OSQ96CW6 309 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 EHD1Q9H4M9 534 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 PPP1R14DQ9NXH3 145 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DDX20Q9UHI6 824 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GLS2Q9UI32 602 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DKKL1Q9UK85 242 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MAU2Q9Y6X3 613 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 PPP1R3GB7ZBB8 358 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 C9J4A7 227 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ATG13O75143 517 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ATP6V1G2O95670 118 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CYP3A4P08684 503 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 EFNA1P20827 205 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SCN1BQ07699 218 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SEMA5AQ13591 1074 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 FOXR2Q6PJQ5 311 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SIRT2Q8IXJ6 389 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GPALPP1Q8IXQ4 340 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 DEFB119Q8N690 84 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CDCA5Q96FF9 252 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TEFMQ96QE5 360 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MTMR9Q96QG7 549 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF184Q99676 751 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CHCHD6Q9BRQ6 235 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 IFT27Q9BW83 186 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 LGR4Q9BXB1 951 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 RBMX2Q9Y388 322 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GRIN2DO15399 1336 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 OR1F1O43749 312 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 UBXN7O94888 489 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 THRBP10828 461 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 HNRNPLP14866 589 aaKnown RBP eCLIP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ACVR2AP27037 513 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ICAM3P32942 547 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ADAM8P78325 824 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 HSPB3Q12988 150 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TAPT1Q6NXT6 567 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 HFE2Q6ZVN8 426 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TMPRSS6Q8IU80 811 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 EIF1ADQ8N9N8 165 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLAIN1Q8ND83 568 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MRPL57Q9BQC6 102 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 PLCL2Q9UPR0 1127 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 VSTM5A8MXK1 200 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 E5RJQ4 531 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 RFXANKO14593 260 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SNRPB2P08579 225 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CDC25CP30307 473 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TNK2Q07912 1038 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GPR107Q5VW38 600 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 POLNQ7Z5Q5 900 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 OR2L2Q8NH16 312 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 BRF2Q9HAW0 419 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SH3BGRL2Q9UJC5 107 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CPS1P31327 1500 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ALPPL2P10696 532 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SLC7A1P30825 629 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms