RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TPP1O14773 563 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 NOBOXO60393 691 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 SLC25A14O95258 325 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 EML2O95834 649 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 KRT14P02533 472 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 PYGLP06737 847 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 APRTP07741 180 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 CKMT1AP12532 417 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ARSDP51689 593 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 BASP1P80723 227 aaKnown RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 DAB2P98082 770 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 SEPT6Q14141 434 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ELOCQ15369 112 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 PERM1Q5SV97 790 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ZCCHC8Q6NZY4 707 aaKnown RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 SLC30A9Q6PML9 568 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 CRTC3Q6UUV7 619 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF534Q76KX8 674 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 GPBAR1Q8TDU6 330 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 PATE1Q8WXA2 126 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ADAMTS14Q8WXS8 1223 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF778Q96MU6 729 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 OR2M4Q96R27 311 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
SYNE2-214ENST00000554928 ZSCAN5AQ9BUG6 496 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 CASS4Q9NQ75 786 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 KCND1Q9NSA2 647 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 GULP1Q9UBP9 304 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 SLC2A6Q9UGQ3 507 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 GPR34Q9UPC5 381 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 PKP3Q9Y446 797 aa12.23□□□□□ -0.45
SYNE2-214ENST00000554928 BPTFQ12830 3046 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CPED1A4D0V7 1026 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 FAM149AA5PLN7 773 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 OR51F1A6NGY5 319 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 B4DGG1 531 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 E7EVH7 732 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CES2O00748 559 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 PSMD3O43242 534 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 NUAK1O60285 661 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 PHF2O75151 1096 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 RFPL3O75679 317 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 PRAMEF1O95521 474 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 ALPPL2P10696 532 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 ACP5P13686 325 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 TCP1P17987 556 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 ACP1P24666 158 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 MSNP26038 577 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 LMAN1P49257 510 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CTSCP53634 463 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CRADDP78560 199 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 PLA2G4EQ3MJ16 856 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 PPP1R21Q6ZMI0 780 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 GALNT13Q8IUC8 556 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 ZNF547Q8IVP9 402 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 VPS35Q96QK1 796 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 DUSP23Q9BVJ7 150 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 SCNM1Q9BWG6 230 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 DDX47Q9H0S4 455 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 CDH19Q9H159 772 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 TRIM39Q9HCM9 518 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 RAD18Q9NS91 495 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 TRNAU1APQ9NX07 287 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 TAAR2Q9P1P5 351 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 VPS18Q9P253 973 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 ZNHIT2Q9UHR6 403 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 APOBEC2Q9Y235 224 aaKnown RBP12.22□□□□□ -0.45
SYNE2-214ENST00000554928 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
SYNE2-214ENST00000554928 MROH6A6NGR9 719 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 GRID2O43424 1007 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 SRP72O76094 671 aaKnown RBP12.21□□□□□ -0.45
SYNE2-214ENST00000554928 TMEM63AO94886 807 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 CRTAMO95727 393 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 ACTN2P35609 894 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 ACTR1BP42025 376 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 PTGIRP43119 386 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 MAZP56270 477 aaKnown RBP12.21□□□□□ -0.45
SYNE2-214ENST00000554928 SESN2P58004 480 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-214ENST00000554928 ACTR1AP61163 376 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 B4GALNT1Q00973 533 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 CDH17Q12864 832 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 GPS1Q13098 491 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 KCNJ11Q14654 390 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 NR0B2Q15466 257 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 PDPK2PQ6A1A2 396 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 OGFOD3Q6PK18 319 aa12.21□□□□□ -0.45
SYNE2-214ENST00000554928 CHST15Q7LFX5 561 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms