RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 RHOCP08134 193 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 KRT7P08729 469 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 FGF3P11487 239 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CCL4P13236 92 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 LIFP15018 202 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 POU3F2P20265 443 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 RRM1P23921 792 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 HTR1BP28222 390 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 UGT1A3P35503 534 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ETFBP38117 255 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ECI1P42126 302 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 DNA2P51530 1060 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 MLLT10P55197 1068 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 B4GALNT1Q00973 533 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 MC1RQ01726 317 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CUL4AQ13619 759 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 C16orf72Q14CZ0 275 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TESK1Q15569 626 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CERCAMQ5T4B2 595 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 MROH9Q5TGP6 573 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CAPRIN2Q6IMN6 1127 aaKnown RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TMEM270Q6UE05 265 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 SPRED1Q7Z699 444 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TMEM110Q86TL2 294 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 SETD3Q86TU7 594 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PIM3Q86V86 326 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 VPS36Q86VN1 386 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 HEATR4Q86WZ0 1026 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TICAM1Q8IUC6 712 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CACNA2D3Q8IZS8 1091 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PCDH20Q8N6Y1 951 aaKnown RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 UBR7Q8N806 425 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CCDC112Q8NEF3 446 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 FAM46DQ8NEK8 389 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ATL2Q8NHH9 583 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 DIO2Q92813 273 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TSACCQ96A04 125 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ZNF396Q96N95 335 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PSMB7Q99436 277 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 THAP9Q9H5L6 903 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PCDH18Q9HCL0 1135 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ST7Q9NRC1 585 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 HECAQ9UBI9 543 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 VPS51Q9UID3 782 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 VANGL2Q9ULK5 521 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PNMA8BQ9ULN7 279 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 MYRFQ9Y2G1 1151 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PCDHB4Q9Y5E5 795 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 PLXNA2O75051 1894 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DRGXA6NNA5 263 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 EFCAB7A8K855 629 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 AREL1O15033 823 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 CETN3O15182 167 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 NUDT21O43809 227 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 SUSD5O60279 629 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 RAD1O60671 282 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 YEATS4O95619 227 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 PRKCGP05129 697 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 SNRPB2P08579 225 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 GNLYP22749 145 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 IGFALSP35858 605 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 GPD2P43304 727 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 CCNHP51946 323 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 SRP54P61011 504 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 LRMPQ12912 555 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 TRA2AQ13595 282 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 HLTFQ14527 1009 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DEFB109BQ30KR1 87 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 EDRF1Q3B7T1 1238 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 C14orf28Q4W4Y0 310 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ZNF805Q5CZA5 627 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DCAF12Q5T6F0 453 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ACBD5Q5T8D3 534 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 RESP18Q5W5W9 173 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 TCTN3Q6NUS6 607 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 C22orf39Q6P5X5 142 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ENPP7Q6UWV6 458 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 LRRC31Q6UY01 552 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 LINGO4Q6UY18 593 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ZNF783Q6ZMS7 281 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 PARS2Q7L3T8 475 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 TAF8Q7Z7C8 310 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 TTC7BQ86TV6 843 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 GRAMD1CQ8IYS0 662 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DEFB106AQ8N104 65 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 GUF1Q8N442 669 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 RYBPQ8N488 228 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DCAF4L2Q8NA75 395 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 CCDC47Q96A33 483 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 KIAA1143Q96AT1 154 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ISG20Q96AZ6 181 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 C1orf159Q96HA4 380 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 C1orf74Q96LT6 269 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ZSWIM1Q9BR11 485 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms