RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HNRNPH2P55795 449 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 RRP1P56182 461 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 CSNK2A1P68400 391 aaPredicted RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 MRPS34P82930 218 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 SPOCK1Q08629 439 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 SETMARQ53H47 684 aaPredicted RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 TDRD12Q587J7 1177 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 DAB2IPQ5VWQ8 1189 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 ZNF34Q8IZ26 560 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 ACVR1CQ8NER5 493 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 CSNK2A3Q8NEV1 391 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 TMED6Q8WW62 240 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 SF3B5Q9BWJ5 86 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 MRPL44Q9H9J2 332 aaKnown RBP5.12□□□□□ -1.59
CHD8-207ENST00000554384 EPB41L5Q9HCM4 733 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 HIF1ANQ9NWT6 349 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 B3GALT5Q9Y2C3 310 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 TTLL3Q9Y4R7 772 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 UHRF1BP1Q6BDS2 1440 aa5.12□□□□□ -1.59
CHD8-207ENST00000554384 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 PLOD3O60568 738 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 TOM1O60784 492 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 HIST1H2ABP04908 130 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 NR2F1P10589 423 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 ZNF12P17014 697 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 TRIM21P19474 475 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 HIST1H2ADP20671 130 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 SAT1P21673 171 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 UBA1P22314 1058 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 APOBEC1P41238 236 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 MMP14P50281 582 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 TMF1P82094 1093 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 ZBED6P86452 979 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 TFAP4Q01664 338 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 CRYZQ08257 329 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 KCNC3Q14003 757 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 TWIST1Q15672 202 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 DENND5BQ6ZUT9 1274 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 HIST3H2AQ7L7L0 130 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 CACNA2D4Q7Z3S7 1137 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 NRROSQ86YC3 692 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 CHERPQ8IWX8 916 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 KCTD6Q8NC69 237 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 OR1J2Q8NGS2 313 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 DUSP19Q8WTR2 217 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 SMG7Q92540 1137 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 LRRC59Q96AG4 307 aaKnown RBP5.11□□□□□ -1.59
CHD8-207ENST00000554384 GCNAQ96QF7 691 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 C17orf75Q9HAS0 396 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 FBXW11Q9UKB1 542 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 ACSL5Q9ULC5 683 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 CFAP43Q8NDM7 1665 aa5.11□□□□□ -1.59
CHD8-207ENST00000554384 EIF4E1BA6NMX2 242 aaKnown RBP5.1□□□□□ -1.59
CHD8-207ENST00000554384 KCNJ13O60928 360 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 CLDN14O95500 239 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 IL11P20809 199 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 SCP2P22307 547 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 HOXC9P31274 260 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 TAS2R38P59533 333 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 SREBF2Q12772 1141 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 PLCB4Q15147 1175 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 CTF1Q16619 201 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 NTRK2Q16620 822 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 XKR9Q5GH70 373 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 PPP6R3Q5H9R7 873 aaPredicted RBP5.1□□□□□ -1.59
CHD8-207ENST00000554384 KCNT1Q5JUK3 1230 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 ERICH3Q5RHP9 1530 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 RARS2Q5T160 578 aaKnown RBP5.1□□□□□ -1.59
CHD8-207ENST00000554384 RGMBQ6NW40 437 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 ATG9AQ7Z3C6 839 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 POGZQ7Z3K3 1410 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 CCDC190Q86UF4 302 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 CEP97Q8IW35 865 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 ZBTB8BQ8NAP8 495 aaPredicted RBP5.1□□□□□ -1.59
CHD8-207ENST00000554384 GSDMBQ8TAX9 411 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 SCMH1Q96GD3 660 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 ATXN2Q99700 1313 aaKnown RBP5.1□□□□□ -1.59
CHD8-207ENST00000554384 SH3GL2Q99962 352 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 APOL6Q9BWW8 343 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 DNAJC18Q9H819 358 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 STK39Q9UEW8 545 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 KCNS2Q9ULS6 477 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 PCDHA7Q9UN72 937 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 FAM169AQ9Y6X4 670 aa5.1□□□□□ -1.59
CHD8-207ENST00000554384 ZCCHC11Q5TAX3 1644 aaKnown RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 LRRC72A6NJI9 287 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 SMAD9O15198 467 aaKnown RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 SPINT2O43291 252 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 RSL1D1O76021 490 aaKnown RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 KDM4BO94953 1096 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 ZWINTO95229 277 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 AFPP02771 609 aaKnown RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 HSP90AA1P07900 732 aaKnown RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 ACAA1P09110 424 aaPredicted RBP5.09□□□□□ -1.59
CHD8-207ENST00000554384 STAT2P52630 851 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 PGGT1BP53609 377 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 FOXM1Q08050 763 aa5.09□□□□□ -1.59
CHD8-207ENST00000554384 NFATC4Q14934 902 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms