RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ACP5P13686 325 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DESP17661 470 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PSMA4P25789 261 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 MARK3P27448 753 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 SSTR2P30874 369 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TTKP33981 857 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 BSGP35613 385 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PSMB10P40306 273 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 NRIP1P48552 1158 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 AMPHP49418 695 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CDH8P55286 799 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 POLR2FP61218 127 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 CYP4A11Q02928 519 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TBL3Q12788 808 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 TMEM115Q12893 351 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 PTP4A2Q12974 167 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 ZBTB17Q13105 803 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CRYMQ14894 314 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 NTRK2Q16620 822 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KYNUQ16719 465 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TTC31Q49AM3 519 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 PLEKHO1Q53GL0 409 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 ZNF805Q5CZA5 627 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 FAM72AQ5TYM5 149 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TBC1D9BQ66K14 1250 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TYW3Q6IPR3 259 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 FAM72DQ6L9T8 149 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DENND1BQ6P3S1 775 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DCLRE1AQ6PJP8 1040 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PET117Q6UWS5 81 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DENND5BQ6ZUT9 1274 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 CHST9Q7L1S5 443 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 RRM2BQ7LG56 351 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CATSPER4Q7RTX7 472 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 GALNT7Q86SF2 657 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MON1AQ86VX9 555 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 FAM72BQ86X60 149 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 UNC45BQ8IWX7 931 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 NAT8LQ8N9F0 302 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 POC5Q8NA72 575 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 LSM14AQ8ND56 463 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 MOSPD2Q8NHP6 518 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 GDAP1Q8TB36 358 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 LNX1Q8TBB1 728 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 POMGNT1Q8WZA1 660 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KLHL29Q96CT2 875 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 ELP4Q96EB1 424 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PERPQ96FX8 193 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KLHL15Q96M94 604 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 SPAG5Q96R06 1193 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CITED2Q99967 270 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 HGH1Q9BTY7 390 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 THUMPD3Q9BV44 507 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 ACAT2Q9BWD1 397 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 NPFFR1Q9GZQ6 430 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CTDSP1Q9GZU7 261 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 ANKRD2Q9GZV1 360 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 LHPPQ9H008 270 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MUC13Q9H3R2 512 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 SLC32A1Q9H598 525 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 OPA3Q9H6K4 179 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TTC12Q9H892 705 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 FBRSL1Q9HCM7 1045 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 ZNF334Q9HCZ1 680 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 RRP7BPQ9NSQ0 103 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PDRG1Q9NUG6 133 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KCND2Q9NZV8 630 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 UPB1Q9UBR1 384 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MORF4L1Q9UBU8 362 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MOSPD1Q9UJG1 213 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MKLN1Q9UL63 735 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PPIEQ9UNP9 301 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 RCE1Q9Y256 329 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 PTRH2Q9Y3E5 179 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 POMT1Q9Y6A1 747 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 GPRASP1Q5JY77 1395 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 A0A0U1RQK1 487 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ARHGAP10A1A4S6 786 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZNF320A2RRD8 509 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CPED1A4D0V7 1026 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZNF587BE7ETH6 402 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 H0YAE9 185 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CHL1O00533 1208 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CPLX1O14810 134 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SLC7A4O43246 635 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TGFB1I1O43294 461 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TNFSF14O43557 240 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 HTATSF1O43719 755 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 HMMRO75330 724 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TBX10O75333 385 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SEC14L2O76054 403 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CH25HO95992 272 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 EIF2S1P05198 315 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 URODP06132 367 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 RB1P06400 928 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 QDPRP09417 244 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 MYBL1P10243 752 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TNNT1P13805 278 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 FDPSP14324 419 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms