RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMEM245Q9H330 911 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 C20orf96Q9NUD7 363 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ZFATQ9P243 1243 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 IL17BQ9UHF5 180 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 LGALS13Q9UHV8 139 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 RELNP78509 3460 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 LDB2O43679 373 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF217O75362 1048 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 SYF2O95926 243 aaKnown RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 UGT2B4P06133 528 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 LPOP22079 712 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 XPAP23025 273 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 CNTFP26441 200 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 GKP32189 559 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 SLCO1A2P46721 670 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 PRAMEP78395 509 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 TARDBPQ13148 414 aaKnown RBP eCLIP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 THOC5Q13769 683 aaKnown RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 TRMT10BQ6PF06 316 aaKnown RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 CES3Q6UWW8 571 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 MARK2Q7KZI7 788 aaKnown RBP14.42□□□□□ -0.1
SHMT2-208ENST00000553868 KCNMB4Q86W47 210 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 LMNTD2Q8IXW0 634 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 KRT222Q8N1A0 295 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 CHST14Q8NCH0 376 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 TMIEQ8NEW7 156 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 GRIN3AQ8TCU5 1115 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 DNASE2BQ8WZ79 361 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 FGF11Q92914 225 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 PTPRN2Q92932 1015 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 ATP6V1G3Q96LB4 118 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 ACOX2Q99424 681 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 C19orf43Q9BQ61 176 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 DHRS4Q9BTZ2 278 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 GPR63Q9BZJ6 419 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 PLAC1Q9HBJ0 212 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 CD248Q9HCU0 757 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 TREX1Q9NSU2 369 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 DKK3Q9UBP4 350 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF180Q9UJW8 692 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF711Q9Y462 761 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 PCDHGB2Q9Y5G2 931 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 SLCO1B1Q9Y6L6 691 aa14.42□□□□□ -0.1
SHMT2-208ENST00000553868 NOTCH2Q04721 2471 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 A0A0J9YYE9 177 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 IQANK1A0A1B0GTG1 560 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 A0A1B0GVT2 93 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 C1QTNF3-AMACRE9PGA6 284 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 SLC7A4O43246 635 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 BRINP1O60477 761 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 LEFTY1O75610 366 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 TRBC1P01850 177 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 SLC8A1P32418 973 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 HADHAP40939 763 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ABL2P42684 1182 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 RHDQ02161 417 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ACVR1Q04771 509 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 CNGA3Q16281 694 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 UGP2Q16851 508 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF805Q5CZA5 627 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ARSIQ5FYB1 569 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 C9orf64Q5T6V5 341 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 EGFLAMQ63HQ2 1017 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ESRP1Q6NXG1 681 aaKnown RBP14.41□□□□□ -0.1
SHMT2-208ENST00000553868 ADGRD1Q6QNK2 874 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 CHPFQ8IZ52 775 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 FOXJ1Q92949 421 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 WBP1Q96G27 269 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 PPP1R16AQ96I34 528 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 KLHL32Q96NJ5 620 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 LYSMD1Q96S90 227 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 TRIM56Q9BRZ2 755 aaKnown RBP14.41□□□□□ -0.1
SHMT2-208ENST00000553868 FBRSQ9HAH7 460 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 FAM53CQ9NYF3 392 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 OGFRQ9NZT2 677 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 PPIL1Q9Y3C6 166 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 PKP3Q9Y446 797 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 SPO11Q9Y5K1 396 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 STON1Q9Y6Q2 735 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 WASF2Q9Y6W5 498 aa14.41□□□□□ -0.1
SHMT2-208ENST00000553868 BCAT2O15382 392 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 STX7O15400 261 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 SYNCRIPO60506 623 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 RNASEH1O60930 286 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 SIN3BO75182 1162 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 KRT38O76015 456 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 VAPBO95292 243 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 EPHX1P07099 455 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 PIRTP0C851 137 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ERVK-10P10266 1014 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 CYP2A6P11509 494 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 PSMA3P25788 255 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 SUOXP51687 545 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 IL9RQ01113 521 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ENPP2Q13822 863 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 RTP5Q14D33 572 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 EFTUD2Q15029 972 aaKnown RBP eCLIP14.4□□□□□ -0.15e-9■■■■■ 36.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms