RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TEX44Q53QW1 395 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ARTNQ5T4W7 220 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 TTC19Q6DKK2 380 aaPredicted RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 RWDD4Q6NW29 188 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 KYAT3Q6YP21 454 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 PTAR1Q7Z6K3 402 aaPredicted RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 SLC26A11Q86WA9 606 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SRRM1Q8IYB3 904 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF567Q8N184 647 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF843Q8N446 348 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ATPAF2Q8N5M1 289 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 PCDH20Q8N6Y1 951 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 FATE1Q969F0 183 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 CCT8L2Q96SF2 557 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 WDR83Q9BRX9 315 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 SPON2Q9BUD6 331 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 GBA3Q9H227 469 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 POLR1BQ9H9Y6 1135 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 KCNK9Q9NPC2 374 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SEPT10Q9P0V9 454 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 CTNNAL1Q9UBT7 734 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 TBK1Q9UHD2 729 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 FADS3Q9Y5Q0 445 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 CSNK1G3Q9Y6M4 447 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 U3KQA8 63 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 TCRBV9S1A1TA0A576 114 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 RAD51BO15315 384 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 AP1G1O43747 822 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 LZTS3O60299 673 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 FAM155BO75949 473 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 NEBLO76041 1014 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 CSF2P04141 144 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 CNTFP26441 200 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 SERPINB9P50453 376 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 KIF26BQ2KJY2 2108 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 CARD16Q5EG05 197 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 HP1BP3Q5SSJ5 553 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 FAXCQ5TGI0 409 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 BROXQ5VW32 411 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ZCCHC8Q6NZY4 707 aaKnown RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 PCSK4Q6UW60 755 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF534Q76KX8 674 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF605Q86T29 641 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 RTL3Q8N8U3 475 aaKnown RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 IFI44Q8TCB0 444 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF473Q8WTR7 871 aaKnown RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 SLC44A1Q8WWI5 657 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 CDKL2Q92772 493 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 MTBPQ96DY7 904 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 STAMBPL1Q96FJ0 436 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 NAF1Q96HR8 494 aaKnown RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 SIGLEC10Q96LC7 697 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-209ENST00000553659 TRABDQ9H4I3 376 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ATP13A1Q9HD20 1204 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF212Q9UDV6 495 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 RSPH14Q9UHP6 348 aa15.99■□□□□ 0.15
ACTN1-209ENST00000553659 MAGEB16A2A368 324 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 H3BM21 787 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 ERVH48-1M5A8F1 160 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 BANF1O75531 89 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 ZWINTO95229 277 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 AP2A1O95782 977 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 NME1P15531 152 aaKnown RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 RHOQP17081 205 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 PGAM1P18669 254 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 PSMB4P28070 264 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 RABIFP47224 123 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 CCNHP51946 323 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 NDST2P52849 883 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 UCNP55089 124 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 TMPRSS3P57727 454 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 ARF5P84085 180 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 GNA12Q03113 381 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 SGCGQ13326 291 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 FRG1Q14331 258 aaKnown RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 STEAP4Q687X5 459 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 CAPN12Q6ZSI9 719 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 LINC00523Q86TU6 105 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 PARGQ86W56 976 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 LRRC6Q86X45 466 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 KLHDC8BQ8IXV7 354 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 PLPP6Q8IY26 295 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 CYP4X1Q8N118 509 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 NPWQ8N729 165 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF548Q8NEK5 533 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 MAPK15Q8TD08 544 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 TEKT5Q96M29 485 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 KLF6Q99612 283 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 C1QTNF2Q9BXJ5 285 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 ZYG11BQ9C0D3 744 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 LRRC40Q9H9A6 602 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 NCKIPSDQ9NZQ3 722 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 IPO11Q9UI26 975 aaKnown RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 NEU3Q9UQ49 428 aa15.98■□□□□ 0.15
ACTN1-209ENST00000553659 AAR2Q9Y312 384 aaKnown RBP15.98■□□□□ 0.15
ACTN1-209ENST00000553659 CXorf51AA0A1B0GTR3 108 aa15.97■□□□□ 0.15
ACTN1-209ENST00000553659 CAPN8A6NHC0 703 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms