RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TACC2O95359 2948 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 NPIPB15A6NHN6 443 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 C2CD4BA6NLJ0 364 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 HTRA2O43464 458 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 CPP00450 1065 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 ACP5P13686 325 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TNFAIP3P21580 790 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 PON1P27169 355 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 PTPN9P43378 593 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 RRADP55042 308 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 STX17P56962 302 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 UBE2IP63279 158 aaKnown RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 PAK1Q13153 545 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TUBB3Q13509 450 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 PTPRRQ15256 657 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TESK1Q15569 626 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 EXOC3L4Q17RC7 722 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TAF3Q5VWG9 929 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 IZUMO3Q5VZ72 239 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 SPNS3Q6ZMD2 512 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 RFLNAQ6ZTI6 216 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TMEM26Q6ZUK4 368 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 TSPAN33Q86UF1 283 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 BPHLQ86WA6 291 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 JOSD2Q8TAC2 188 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 MR1Q95460 341 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 COX14Q96I36 57 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 CELF6Q96J87 481 aaKnown RBP13.62□□□□□ -0.23
PRPF39-204ENST00000553605 SLC39A8Q9C0K1 460 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 CCDC168Q8NDH2 2452 aa13.62□□□□□ -0.23
PRPF39-204ENST00000553605 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 TTC24A2A3L6 582 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 ARHGAP42A6NI28 874 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 FGF10O15520 208 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 LSM8O95777 96 aaKnown RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 PYGLP06737 847 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 FOLR1P15328 257 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 XRCC1P18887 633 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 VAV2P52735 878 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 RFTN1Q14699 578 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 KYNUQ16719 465 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 NLRP8Q86W28 1048 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 SIDT2Q8NBJ9 832 aaKnown RBP13.61□□□□□ -0.23
PRPF39-204ENST00000553605 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 INPP5DQ92835 1189 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 SCAMP4Q969E2 229 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 SCRN2Q96FV2 425 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 ZDHHC12Q96GR4 267 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 VPS18Q9P253 973 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 SNX7Q9UNH6 387 aa13.61□□□□□ -0.23
PRPF39-204ENST00000553605 A0A0U1RQS6 177 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SOCS5O75159 536 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 VIPP01282 170 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 RENBPP51606 427 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 ART3Q13508 389 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 KCNAB1Q14722 419 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 NAA35Q5VZE5 725 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 IRGCQ6NXR0 463 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SCYL2Q6P3W7 929 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 DCHS2Q6V1P9 2916 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 ZNF517Q6ZMY9 492 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-204ENST00000553605 KCNMB4Q86W47 210 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 PSKH2Q96QS6 385 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 CHST8Q9H2A9 424 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SP110Q9HB58 689 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SIX2Q9NPC8 291 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 WASH6PQ9NQA3 447 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 CTNND2Q9UQB3 1225 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 KLF2Q9Y5W3 355 aaPredicted RBP13.6□□□□□ -0.23
PRPF39-204ENST00000553605 SVILO95425 2214 aa13.6□□□□□ -0.23
PRPF39-204ENST00000553605 A0A1B0GUH1 482 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 CPNE3O75131 537 aaKnown RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 KLK3P07288 261 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 HSP90AA1P07900 732 aaKnown RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 SNRPB2P08579 225 aaKnown RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 SLC19A1P41440 591 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 CAPZBP47756 277 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 NOMO3P69849 1222 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 ACY1Q03154 408 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 GPS2Q13227 327 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 FAM69BQ5VUD6 431 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 USP45Q70EL2 814 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 ZNF765Q7L2R6 523 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 FJX1Q86VR8 437 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 PHYKPLQ8IUZ5 450 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 TRIM48Q8IWZ4 208 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 FMR1NBQ8N0W7 255 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-204ENST00000553605 ZBTB2Q8N680 514 aa13.59□□□□□ -0.23
PRPF39-204ENST00000553605 ENDOVQ8N8Q3 282 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms