RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CACNA1AO00555 2505 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 GOLGA4Q13439 2230 aaKnown RBP22.59■■□□□ 1.21
TDP1-206ENST00000553569 LY6G6EA0A0G2JKS1 128 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 DNAJC6O75061 913 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 AK4P27144 223 aaPredicted RBP22.59■■□□□ 1.21
TDP1-206ENST00000553569 ITGA9Q13797 1035 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 CCDC38Q502W7 563 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 PYCR3Q53H96 274 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 CERCAMQ5T4B2 595 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 CREG2Q8IUH2 290 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 SDR16C5Q8N3Y7 309 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 FAM181AQ8N9Y4 354 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 KYQ8NBH2 561 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 FAM46DQ8NEK8 389 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 GRK7Q8WTQ7 553 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 VPS35Q96QK1 796 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 BOCQ9BWV1 1114 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 GSDMCQ9BYG8 508 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 DDX47Q9H0S4 455 aaKnown RBP22.59■■□□□ 1.21
TDP1-206ENST00000553569 CASS4Q9NQ75 786 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 TRNAU1APQ9NX07 287 aaKnown RBP22.59■■□□□ 1.21
TDP1-206ENST00000553569 GULP1Q9UBP9 304 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 U3KQA8 63 aa22.59■■□□□ 1.21
TDP1-206ENST00000553569 B4DGG1 531 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 RFPL3O75679 317 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 CKMT1AP12532 417 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 ZNF8P17098 575 aaPredicted RBP22.58■■□□□ 1.21
TDP1-206ENST00000553569 CASQ1P31415 396 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 CA5AP35218 305 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 CTBSQ01459 385 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 NR0B2Q15466 257 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 KHDC1Q4VXA5 237 aaKnown RBP22.58■■□□□ 1.21
TDP1-206ENST00000553569 SLC30A9Q6PML9 568 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 LVRNQ6Q4G3 990 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 CRTC3Q6UUV7 619 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 SYT10Q6XYQ8 523 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 MICALCLQ6ZW33 695 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 ADGRG6Q86SQ4 1221 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 SLC35F3Q8IY50 421 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 GPBAR1Q8TDU6 330 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 GLMNQ92990 594 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 TRIM39Q9HCM9 518 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 EVA1BQ9NVM1 165 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 APPL1Q9UKG1 709 aa22.58■■□□□ 1.21
TDP1-206ENST00000553569 ZFC3H1O60293 1989 aaKnown RBP22.58■■□□□ 1.2
TDP1-206ENST00000553569 SRP72O76094 671 aaKnown RBP22.57■■□□□ 1.2
TDP1-206ENST00000553569 ECEL1O95672 775 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 ACP1P24666 158 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 HADHAP40939 763 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 ETF1P62495 437 aaKnown RBP22.57■■□□□ 1.2
TDP1-206ENST00000553569 NRROSQ86YC3 692 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 ARL10Q8N8L6 244 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 ZNF398Q8TD17 642 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 DTX3LQ8TDB6 740 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 DPEP2Q9H4A9 486 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 ASB8Q9H765 288 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 RMI1Q9H9A7 625 aa22.57■■□□□ 1.2
TDP1-206ENST00000553569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 TCRBV7S3A2A0A539 114 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 GRID2O43424 1007 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 HYAL3O43820 417 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 NUAK1O60285 661 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 TOP3BO95985 862 aaKnown RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 ACP5P13686 325 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 TPSB2P20231 275 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PMLP29590 882 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 ACTR1BP42025 376 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PAFAH1B1P43034 410 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 DUSP3P51452 185 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 SESN2P58004 480 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 ACTR1AP61163 376 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 XIAPP98170 497 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PEX6Q13608 980 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PPP1R7Q15435 360 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 TPSAB1Q15661 275 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PLA2G4EQ3MJ16 856 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 GPRC6AQ5T6X5 926 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 GUSBP11Q6P575 273 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 DHRS13Q6UX07 377 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 CHST15Q7LFX5 561 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 SFTPA2Q8IWL1 248 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 KLHL7Q8IXQ5 586 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 CHCHD4Q8N4Q1 142 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 STYXQ8WUJ0 223 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 ADAMTS14Q8WXS8 1223 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 NLE1Q9NVX2 485 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 NCKIPSDQ9NZQ3 722 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 TAAR2Q9P1P5 351 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 CRLS1Q9UJA2 301 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 NEU2Q9Y3R4 380 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 PCDHGA1Q9Y5H4 931 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 ST14Q9Y5Y6 855 aa22.56■■□□□ 1.2
TDP1-206ENST00000553569 ARHGEF17Q96PE2 2063 aaPredicted RBP22.56■■□□□ 1.2
TDP1-206ENST00000553569 HEATR9A2RTY3 570 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 CPED1A4D0V7 1026 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 DKK1O94907 266 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 CDK14O94921 469 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 TRIM16O95361 564 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 SPINK2P20155 84 aa22.55■■□□□ 1.2
TDP1-206ENST00000553569 ITGALP20701 1170 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms