RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PDHA1P08559 390 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 TCF4P15884 667 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CR2P20023 1033 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CES1P23141 567 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 IL1R2P27930 398 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 MC1RQ01726 317 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 DSC2Q02487 901 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 TLE1Q04724 770 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 SEPT6Q14141 434 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CLCA4Q14CN2 919 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 PTPRRQ15256 657 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 PYCR3Q53H96 274 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 ODF2Q5BJF6 829 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 TMEM71Q6P5X7 295 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 C17orf82Q86X59 251 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 LRRC49Q8IUZ0 686 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 NLGN4XQ8N0W4 816 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 KCTD6Q8NC69 237 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CCNYQ8ND76 341 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 NLGN4YQ8NFZ3 816 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 C9orf43Q8TAL5 461 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 ZNF564Q8TBZ8 553 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 HTR3CQ8WXA8 447 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 MRRFQ96E11 262 aaKnown RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CTRCQ99895 268 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 HERPUD2Q9BSE4 406 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 SYT11Q9BT88 431 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 ANP32EQ9BTT0 268 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 FUCA2Q9BTY2 467 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 RBM22Q9NW64 420 aaKnown RBP eCLIP9.83□□□□□ -0.843e-6■■□□□ 13.2
ACTN1-208ENST00000553370 GEMIN8Q9NWZ8 242 aaKnown RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 OCIAD1Q9NX40 245 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 AIPL1Q9NZN9 384 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 RCOR3Q9P2K3 495 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 KCNK6Q9Y257 313 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 CHKBQ9Y259 395 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 PRKAB1Q9Y478 270 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 PCDHGA3Q9Y5H0 932 aa9.83□□□□□ -0.84
ACTN1-208ENST00000553370 TNRC6AQ8NDV7 1962 aaKnown RBP9.83□□□□□ -0.84
ACTN1-208ENST00000553370 SPTBP11277 2137 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 B4E171 279 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 FUCA1P04066 466 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 ZNF16P17020 682 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 WT1P19544 449 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 MX2P20592 715 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 MAP4P27816 1152 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 GARSP41250 739 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TSPAN7P41732 249 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 PRKCIP41743 596 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TNNT3P45378 269 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 FASLGP48023 281 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 STC1P52823 247 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 FOXM1Q08050 763 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 NCAPHQ15003 741 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 IFI16Q16666 785 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 INSCQ1MX18 579 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 PLA2G4EQ3MJ16 856 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 ZNF569Q5MCW4 686 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 ALS2CLQ60I27 953 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 E4F1Q66K89 784 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 RFLNAQ6ZTI6 216 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 APTXQ7Z2E3 356 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TECPR1Q7Z6L1 1165 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 MAP7D3Q8IWC1 876 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 PIH1D2Q8WWB5 315 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 NSMCE3Q96MG7 304 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 SPATA16Q9BXB7 569 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 SLC12A9Q9BXP2 914 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TDRD1Q9BXT4 1180 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 ADGRE3Q9BY15 652 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 THAP2Q9H0W7 228 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 TRIT1Q9H3H1 467 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 PCDH9Q9HC56 1237 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 VPS18Q9P253 973 aa9.82□□□□□ -0.84
ACTN1-208ENST00000553370 BZW2Q9Y6E2 419 aaKnown RBP9.82□□□□□ -0.84
ACTN1-208ENST00000553370 PIKFYVEQ9Y2I7 2098 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 BSNQ9UPA5 3926 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 PDZK1P1A8MUH7 402 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 POLR1CO15160 346 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-208ENST00000553370 SUV39H1O43463 412 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 RASSF9O75901 435 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 STK17BO94768 372 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 CLDN7O95471 211 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 PEX11BO96011 259 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 SOD1P00441 154 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 VIPP01282 170 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 AMD1P17707 334 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 TCN2P20062 427 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 CD86P42081 329 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 EPHA4P54764 986 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 RPL26P61254 145 aaKnown RBP9.81□□□□□ -0.84
ACTN1-208ENST00000553370 PTSQ03393 145 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 GALNT2Q10471 571 aa9.81□□□□□ -0.84
ACTN1-208ENST00000553370 CDC20Q12834 499 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms