RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 TIAL1Q01085 375 aaKnown RBP eCLIP17.44■□□□□ 0.38
SYNE3-202ENST00000553340 ATP1A4Q13733 1029 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 MFSD10Q14728 455 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 GLT1D1Q96MS3 346 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 NOL6Q9H6R4 1146 aaKnown RBP17.44■□□□□ 0.38
SYNE3-202ENST00000553340 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 A0A1B0GTL3 188 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 SUPT3HB4E1H0 165 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 CFAP99D6REC4 459 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 J3QRK9 145 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 B4GAT1O43505 415 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 ECT2LQ008S8 904 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 ZIK1Q3SY52 487 aaPredicted RBP17.44■□□□□ 0.38
SYNE3-202ENST00000553340 ANKS6Q68DC2 871 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 FAM171BQ6P995 826 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 FBXO39Q8N4B4 442 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 SLC15A4Q8N697 577 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 STAG3L4Q8TBR4 150 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 BPIFB1Q8TDL5 484 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 FBXL8Q96CD0 374 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 NSMCE2Q96MF7 247 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 AGO3Q9H9G7 860 aaKnown RBP17.44■□□□□ 0.38
SYNE3-202ENST00000553340 UXTQ9UBK9 157 aaPredicted RBP17.44■□□□□ 0.38
SYNE3-202ENST00000553340 PSME2Q9UL46 239 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 TIMM22Q9Y584 194 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 PCDHGA4Q9Y5G9 962 aa17.44■□□□□ 0.38
SYNE3-202ENST00000553340 WASH4PA8MWX3 477 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 J3KR12 359 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 GOT2P00505 430 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 C1RP00736 705 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 FUCA1P04066 466 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 HRH2P25021 359 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ALDH3A2P51648 485 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 AFF1P51825 1210 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 POLR2JP52435 117 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ARSFP54793 590 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 UFM1P61960 85 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 RGS21Q2M5E4 152 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 TIGD5Q53EQ6 642 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 PYCR3Q53H96 274 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ZBTB46Q86UZ6 589 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ACBD6Q9BR61 282 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 TDRD1Q9BXT4 1180 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 GPN2Q9H9Y4 310 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 SLAMF8Q9P0V8 285 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 SEPT3Q9UH03 358 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 RNF112Q9ULX5 631 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 PCDHGA11Q9Y5H2 935 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 KERAO60938 352 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 DEAF1O75398 565 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 SERPINB7O75635 380 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 CHEK2O96017 543 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ENO2P09104 434 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 CES1P23141 567 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ZFP36L2P47974 494 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 MLLT6P55198 1093 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 EMX2Q04743 252 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 IHHQ14623 411 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 CBX2Q14781 532 aaPredicted RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 TMEM214Q6NUQ4 689 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 GALNT18Q6P9A2 607 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 EFL1Q7Z2Z2 1120 aaKnown RBP17.43■□□□□ 0.38
SYNE3-202ENST00000553340 UMODL1-AS1Q8N2C9 162 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 BPIFB6Q8NFQ5 453 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 GPR150Q8NGU9 434 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 SNX19Q92543 992 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 KIAA1191Q96A73 305 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 ZNF599Q96NL3 588 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 PIF1Q9H611 641 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 SP110Q9HB58 689 aa17.43■□□□□ 0.38
SYNE3-202ENST00000553340 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 H0Y858 1186 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 SNX2O60749 519 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 ABCB7O75027 752 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 SULT1C4O75897 302 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 CLPXO76031 633 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 CDH1P12830 882 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 NRG1Q02297 640 aaPredicted RBP17.42■□□□□ 0.38
SYNE3-202ENST00000553340 DAG1Q14118 895 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 CRY1Q16526 586 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 FXNQ16595 210 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 TIGD2Q4W5G0 525 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 GLYATQ6IB77 296 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 NIPAL1Q6NVV3 410 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 TAF2Q6P1X5 1199 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 FATE1Q969F0 183 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 HMCESQ96FZ2 354 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 MAGED4Q96JG8 741 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 NUSAP1Q9BXS6 441 aaKnown RBP17.42■□□□□ 0.38
SYNE3-202ENST00000553340 BRINP2Q9C0B6 783 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 SYTL2Q9HCH5 934 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 TLR9Q9NR96 1032 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 INTS7Q9NVH2 962 aaKnown RBP17.42■□□□□ 0.38
SYNE3-202ENST00000553340 TMLHEQ9NVH6 421 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 MAGEL2Q9UJ55 1249 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 NUDT5Q9UKK9 219 aa17.42■□□□□ 0.38
SYNE3-202ENST00000553340 USP22Q9UPT9 525 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms