RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ECHDC3Q96DC8 303 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ERP44Q9BS26 406 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 L2HGDHQ9H9P8 463 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 XAB2Q9HCS7 855 aaKnown RBP11.34□□□□□ -0.59
TMEM116-218ENST00000552839 DNAJC28Q9NX36 388 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 BFARQ9NZS9 450 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 IL17BQ9UHF5 180 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ANAPC5Q9UJX4 755 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 ITM2BQ9Y287 266 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 SNX24Q9Y343 169 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 PCDHGA8Q9Y5G5 932 aa11.34□□□□□ -0.59
TMEM116-218ENST00000552839 CPED1A4D0V7 1026 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 C2orf81A6NN90 581 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 ANKRD66B4E2M5 251 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 EFSO43281 561 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 AP1G1O43747 822 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 CRTAMO95727 393 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 EPOP01588 193 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 ZNF30P17039 623 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 MMP12P39900 470 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 CHRNA4P43681 627 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 RPS21P63220 83 aaKnown RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 TUBB4BP68371 445 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 PDE1BQ01064 536 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 SLC7A5Q01650 507 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 CLN3Q13286 438 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 MORF4L2Q15014 288 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 ZCCHC8Q6NZY4 707 aaKnown RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 Q6ZSR6 202 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 ABI3BPQ7Z7G0 1075 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 LURAP1LQ8IV03 231 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 OR52K1Q8NGK4 314 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 BMFQ96LC9 184 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 FRMD8Q9BZ67 464 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 FAM117AQ9C073 453 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 TRABDQ9H4I3 376 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 EVA1BQ9NVM1 165 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 PIH1D1Q9NWS0 290 aaKnown RBP11.33□□□□□ -0.6
TMEM116-218ENST00000552839 PKD2L2Q9NZM6 624 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 SHOC2Q9UQ13 582 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 ZNF711Q9Y462 761 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 FADS3Q9Y5Q0 445 aa11.33□□□□□ -0.6
TMEM116-218ENST00000552839 EME2A4GXA9 379 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 POM121BA6NF01 834 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 NPIPB15A6NHN6 443 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 A6NNZ2 444 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CASC3O15234 703 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 STX7O15400 261 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 FZD6O60353 706 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 MMP20O60882 483 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 TM7SF2O76062 418 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CSF2P04141 144 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 LIG3P49916 1009 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 ITGA8P53708 1063 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 ARL4CP56559 192 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CAV1Q03135 178 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 OLIG2Q13516 323 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 FZD2Q14332 565 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 POU6F1Q14863 301 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 SEL1L3Q68CR1 1132 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 FOXR1Q6PIV2 292 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CRTC1Q6UUV9 634 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 RBM44Q6ZP01 1051 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 PTAR1Q7Z6K3 402 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CLEC14AQ86T13 490 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 ZSWIM9Q86XI8 627 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 OTUD6BQ8N6M0 293 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 ZNF548Q8NEK5 533 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 PIH1D2Q8WWB5 315 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 IFT81Q8WYA0 676 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CPT1BQ92523 772 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 GRAMD1AQ96CP6 724 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 SCRN2Q96FV2 425 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 FAM114A2Q9NRY5 505 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 RAD18Q9NS91 495 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 WHRNQ9P202 907 aa11.32□□□□□ -0.6
TMEM116-218ENST00000552839 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
TMEM116-218ENST00000552839 KLF15Q9UIH9 416 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms