RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TOX3O15405 576 aaPredicted RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 HTRA2O43464 458 aaPredicted RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 LSM8O95777 96 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 CCNYL3P0C7X3 344 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 CASP14P31944 242 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 VIPR1P32241 457 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 GFERP55789 205 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 PRSS12P56730 875 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 BPIFB4P59827 614 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 BCL2L1Q07817 233 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 NFATC2Q13469 925 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 SYCP1Q15431 976 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 CRB2Q5IJ48 1285 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 MYO7BQ6PIF6 2116 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 ADAMTSL4Q6UY14 1074 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 Q6ZVL8 140 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 ZC3H18Q86VM9 953 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 OR6C1Q96RD1 312 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 BARD1Q99728 777 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 TBC1D10AQ9BXI6 508 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 GPR87Q9BY21 358 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 TBC1D29Q9UFV1 150 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 DNAJC12Q9UKB3 198 aa11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 PCYT1BQ9Y5K3 369 aaPredicted RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 FER1L5A0AVI2 2057 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 NIPBLQ6KC79 2804 aaeCLIP11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 FAM170AA1A519 330 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 ARGFXA6NJG6 315 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 PSMD11O00231 422 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 MT-ND3P03897 115 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 CYP11B1P15538 503 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 LPOP22079 712 aaPredicted RBP11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 LHCGRP22888 699 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 PTPN4P29074 926 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 SDC4P31431 198 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 GSDMDP57764 484 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 NOMO3P69849 1222 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 TBX2Q13207 712 aaPredicted RBP11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 IL10RAQ13651 578 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 PLEKHN1Q494U1 663 aaPredicted RBP11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 RAET1GQ6H3X3 334 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 RFLNAQ6ZTI6 216 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 SYVN1Q86TM6 617 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 NLRP8Q86W28 1048 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 RASGRP3Q8IV61 690 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 ADAMTS17Q8TE56 1095 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 CPA5Q8WXQ8 436 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 KLHL6Q8WZ60 621 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 COX14Q96I36 57 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 UCK1Q9HA47 277 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 ACSS2Q9NR19 701 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 ASF1BQ9NVP2 202 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 LNPEPQ9UIQ6 1025 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 PYCARDQ9ULZ3 195 aa11.24□□□□□ -0.61
SUPT16H-202ENST00000552829 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 ARHGAP10A1A4S6 786 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 ANKUB1A6NFN9 424 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 LRRC10BA6NIK2 292 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 TIAF1O95411 115 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 PTGIRP43119 386 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 MAPK9P45984 424 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 PPM1FP49593 454 aaPredicted RBP11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 ITGA1P56199 1179 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 AP1S1P61966 158 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 RPS18P62269 152 aaKnown RBP11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SLFN11Q7Z7L1 901 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SLC9B2Q86UD5 537 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 TRIM74Q86UV6 250 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 MCEMP1Q8IX19 187 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 RHOT1Q8IXI2 618 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 FAM172AQ8WUF8 416 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 FCRL4Q96PJ5 515 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SMAD5Q99717 465 aaKnown RBP11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 NUDT9Q9BW91 350 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SLC39A8Q9C0K1 460 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 ABCG8Q9H221 673 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 CATSPERBQ9H7T0 1116 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 SEMA5BQ9P283 1151 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 CPNE7Q9UBL6 633 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 PPIL1Q9Y3C6 166 aa11.23□□□□□ -0.61
SUPT16H-202ENST00000552829 KIR2DS5A0A0G2JLQ3 304 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 A0A0G2JNG1 304 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 A0A1W2PQ67 120 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 NPIPB15A6NHN6 443 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 AKR1B15C9JRZ8 316 aaPredicted RBP11.22□□□□□ -0.61
SUPT16H-202ENST00000552829 KIR2DS3K7RE56 304 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms