RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CCDC110Q8TBZ0 833 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 BLOC1S5Q8TDH9 187 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 FGF11Q92914 225 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 ATXN7L3BQ96GX2 97 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 VPS35Q96QK1 796 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 GORASP1Q9BQQ3 440 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 PKP3Q9Y446 797 aa18.8■□□□□ 0.6
DDX54-208ENST00000551344 RHPN2P1A8MT19 583 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 CASC3O15234 703 aaKnown RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 NRDCO43847 1150 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 VEGFDO43915 354 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 BRINP1O60477 761 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 DXOO77932 396 aaKnown RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 ZNF8P17098 575 aaPredicted RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 PSMB4P28070 264 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 GPR3P46089 330 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 MAZP56270 477 aaKnown RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 GABREP78334 506 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 B4GALNT1Q00973 533 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 BIRC2Q13490 618 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 NR1D2Q14995 579 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 ZNF438Q7Z4V0 828 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 SPRED1Q7Z699 444 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 PHYKPLQ8IUZ5 450 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 SLC35B2Q8TB61 432 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 LRRC45Q96CN5 670 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 ZNF578Q96N58 590 aaPredicted RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 FICDQ9BVA6 458 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 OR2AG1Q9H205 316 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 SYNDIG1Q9H7V2 258 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 IL26Q9NPH9 171 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 PRKAB1Q9Y478 270 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 PCYT1BQ9Y5K3 369 aaPredicted RBP18.79■□□□□ 0.6
DDX54-208ENST00000551344 UNC13CQ8NB66 2214 aa18.79■□□□□ 0.6
DDX54-208ENST00000551344 A0A087WV48 116 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 D6RAR5 112 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 CHUKO15111 745 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 B4GAT1O43505 415 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 MPOP05164 745 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 STIP1P31948 543 aaKnown RBP18.78■□□□□ 0.6
DDX54-208ENST00000551344 SPAM1P38567 509 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 CLCNKAP51800 687 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 CLPPQ16740 277 aaPredicted RBP18.78■□□□□ 0.6
DDX54-208ENST00000551344 PARP6Q2NL67 630 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 TBC1D25Q3MII6 688 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 ATP13A5Q4VNC0 1218 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 SEL1L2Q5TEA6 688 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 IGF2-ASQ6U949 168 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 ADGRG6Q86SQ4 1221 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 KLHDC8BQ8IXV7 354 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 FAM71DQ8N9W8 422 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 WDR36Q8NI36 951 aaKnown RBP18.78■□□□□ 0.6
DDX54-208ENST00000551344 BRSK1Q8TDC3 778 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 TMEM74Q96NL1 305 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 FRMD8P1Q9BZ68 369 aaPredicted RBP18.78■□□□□ 0.6
DDX54-208ENST00000551344 ARNT2Q9HBZ2 717 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
DDX54-208ENST00000551344 PCDHGA8Q9Y5G5 932 aa18.78■□□□□ 0.6
DDX54-208ENST00000551344 TCRBV7S2A1N4TA0A589 114 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 C2orf81A6NN90 581 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 STX7O15400 261 aaKnown RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 CDK14O94921 469 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 CCKBRP32239 447 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 PDX1P52945 283 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 INHBCP55103 352 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 ERVPABLB-1P60509 514 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 EIF3IQ13347 325 aaKnown RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 RPS6KA1Q15418 735 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 TAF1AQ15573 450 aaPredicted RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 ZNF648Q5T619 568 aaPredicted RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 MEI1Q5TIA1 1274 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 ARHGEF18Q6ZSZ5 1173 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 SNIP1Q8TAD8 396 aaKnown RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 PATE1Q8WXA2 126 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 LIN37Q96GY3 246 aaPredicted RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 ALS2CR12Q96Q35 445 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 STRADBQ9C0K7 418 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 ARFGAP3Q9NP61 516 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 TMPRSS11EQ9UL52 423 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 SATB2Q9UPW6 733 aa18.77■□□□□ 0.6
DDX54-208ENST00000551344 R3HDM2Q9Y2K5 976 aaKnown RBP18.77■□□□□ 0.6
DDX54-208ENST00000551344 PKD1L2Q7Z442 2459 aa18.77■□□□□ 0.59
DDX54-208ENST00000551344 CCDC187A0A096LP49 1063 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 OR5K4A6NMS3 321 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 KMOO15229 486 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 PPM1DO15297 605 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 TLX3O43711 291 aaPredicted RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 ACP5P13686 325 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 SLC2A4P14672 509 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 RBMS1P29558 406 aaKnown RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 ALDH4A1P30038 563 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 EIF2S3P41091 472 aaKnown RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 MLLT3P42568 568 aaPredicted RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 FASLGP48023 281 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 PDE1BQ01064 536 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 ZFP36L1Q07352 338 aaKnown RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 TMEM115Q12893 351 aaPredicted RBP18.76■□□□□ 0.59
DDX54-208ENST00000551344 ITGA9Q13797 1035 aa18.76■□□□□ 0.59
DDX54-208ENST00000551344 C3orf38Q5JPI3 329 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms