RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TBC1D29Q9UFV1 150 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNHIT2Q9UHR6 403 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CRYBG3Q68DQ2 2970 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ANKRD62A6NC57 917 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 F5H423 210 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 MTSS1O43312 755 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 KIF1CO43896 1103 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 MFSD11O43934 449 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PRPSAP2O60256 369 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 RAD1O60671 282 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 MAFKO60675 156 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 MTX2O75431 263 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PGLSO95336 258 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CLDN7O95471 211 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 VSIG8P0DPA2 414 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 RARAP10276 462 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ACP5P13686 325 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CR2P20023 1033 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CDK11BP21127 795 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SSR1P43307 286 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SEPHS1P49903 392 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 LIMK2P53671 638 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PPP1CAP62136 330 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 IL10RBQ08334 325 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 NIPAL4Q0D2K0 466 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ILF3Q12906 894 aaKnown RBP eCLIP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 KCNAB2Q13303 367 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SEPT7Q16181 437 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ACBD5Q5T8D3 534 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ARMC12Q5T9G4 340 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ALS2CLQ60I27 953 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PLEKHA7Q6IQ23 1121 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 TECPR1Q7Z6L1 1165 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 C17orf82Q86X59 251 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CBARPQ8N350 705 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 TTC30BQ8N4P2 665 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PIH1D2Q8WWB5 315 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CASKIN2Q8WXE0 1202 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 GRAMD1AQ96CP6 724 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 NAP1L5Q96NT1 182 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CSPG4P5Q96PW8 444 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PSKH2Q96QS6 385 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 TAAR9Q96RI9 348 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 TUBGCP5Q96RT8 1024 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 WDR24Q96S15 920 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC30A3Q99726 388 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SEMA3CQ99985 751 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 GSDMCQ9BYG8 508 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC25A18Q9H1K4 315 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 AKIRIN1Q9H9L7 192 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PRDM8Q9NQV8 689 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 PHPT1Q9NRX4 125 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CHMP5Q9NZZ3 219 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SEPT10Q9P0V9 454 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CNOT8Q9UFF9 292 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 LIMA1Q9UHB6 759 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 CNOT6Q9ULM6 557 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC17A4Q9Y2C5 497 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 ITPR2Q14571 2701 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 SPTBN1Q01082 2364 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 LRBAP50851 2863 aa6.79□□□□□ -1.32
PRPF40B-214ENST00000551320 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ICE1Q9Y2F5 2266 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 A0A1W2PQC6 194 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 FADS2P1A8MWK0 482 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 STMND1H3BQB6 276 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 TMX2-CTNND1H3BSU7 103 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 TNFRSF10CO14798 259 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 HTRA2O43464 458 aaPredicted RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 DNAJB5O75953 348 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 RNF224P0DH78 156 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 THRAP10827 490 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 IL4RP24394 825 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CSTF2P33240 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CA5AP35218 305 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 MMP13P45452 471 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 UQCRFS1P47985 274 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 LEPRP48357 1165 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CSNK1DP48730 415 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 GSCP56915 257 aaPredicted RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CHAF1BQ13112 559 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 EIF3IQ13347 325 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ERV3-1Q14264 604 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 NOMO1Q15155 1222 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ASIC2Q16515 512 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 PYCR3Q53H96 274 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CRTC3Q6UUV7 619 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 CERS6Q6ZMG9 384 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 POLNQ7Z5Q5 900 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
PRPF40B-214ENST00000551320 LURAP1LQ8IV03 231 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms