RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MCMBPQ9BTE3 642 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 CHID1Q9BWS9 393 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 IDI2Q9BXS1 227 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 FOXQ1Q9C009 403 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 TRPV6Q9H1D0 765 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 SEMA6AQ9H2E6 1030 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 MMP27Q9H306 513 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF556Q9HAH1 456 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 RC3H2Q9HBD1 1191 aaKnown RBP5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP26B1Q9NR63 512 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 TBC1D22BQ9NU19 505 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 SMPD3Q9NY59 655 aaPredicted RBP5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 IL37Q9NZH6 218 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 ABCD2Q9UBJ2 740 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 OPTCQ9UBM4 332 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 DCDC2Q9UHG0 476 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 ANAPC2Q9UJX6 822 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 CNTN6Q9UQ52 1028 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 U3KQE9 123 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 SLIT2O94813 1529 aa5.28□□□□□ -1.56
LSM3P2-201ENST00000551246 TAF1LQ8IZX4 1826 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CCDC195A0A1B0GUA6 201 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 A0A1W2PQ72 361 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TCRBV5S2A0A599 114 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 MAGEB16A2A368 324 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 WTIPA6NIX2 430 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CHURC1-FNTBB4DL54 471 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ATP6V1G2-DDX39BF2Z307 99 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 G3V2L1 256 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 H0Y626 953 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 H0YC42 278 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 H3BUI4 141 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 NRP1O14786 923 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 RAD51BO15315 384 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HDAC3O15379 428 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 YKT6O15498 198 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 H2AFYO75367 372 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 MAFO75444 373 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TOM1L1O75674 476 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 SUPT7LO94864 414 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ENDOD1O94919 500 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CSPG5O95196 566 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 EOMESO95936 686 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 GH2P01242 217 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CHRNA1P02708 482 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC4A1P02730 911 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 S100A6P06703 90 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ASNSP08243 561 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HOXD4P09016 255 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 FCGR1AP12314 374 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 KRT10P13645 584 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HSD17B1P14061 328 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ITGA2P17301 1181 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ATF6P18850 670 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CHRM3P20309 590 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ATP6V1B2P21281 511 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ADORA2AP29274 412 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ERP29P30040 261 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ATICP31939 592 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 MSX2P35548 267 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HMGCLP35914 325 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 GP5P40197 560 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 GARSP41250 739 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HTR2BP41595 481 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 RPS9P46781 194 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 SERPINB10P48595 397 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 GZMKP49863 264 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ADCY7P51828 1080 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TPD52P55327 224 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 RPL10AP62906 217 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 NKX3-2P78367 333 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 PRAMEP78395 509 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 RHAGQ02094 409 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNF45Q02386 682 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 RALGDSQ12967 914 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 SEMA5AQ13591 1074 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 COL9A2Q14055 689 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CPSF6Q16630 551 aaKnown RBP eCLIP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 AAK1Q2M2I8 961 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ZFP69Q49AA0 526 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 GTDC1Q4AE62 458 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 PAGE2BQ5JRK9 111 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TOR2AQ5JU69 321 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 KCNT1Q5JUK3 1230 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 SAMD4BQ5PRF9 694 aaKnown RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 ZFYVE27Q5T4F4 411 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 N4BP2L1Q5TBK1 243 aaPredicted RBP5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TIGD3Q6B0B8 471 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 LAMTOR1Q6IAA8 161 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 OVOS1Q6IE37 1185 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 DCUN1D2Q6PH85 259 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 TMEM65Q6PI78 240 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CREB3L2Q70SY1 520 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 BEND5Q7L4P6 421 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CATSPER4Q7RTX7 472 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 HDDC2Q7Z4H3 204 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 POLNQ7Z5Q5 900 aa5.27□□□□□ -1.57
LSM3P2-201ENST00000551246 CLEC14AQ86T13 490 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms