RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MAU2Q9Y6X3 613 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 CELSR3Q9NYQ7 3312 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 FRYLO94915 3013 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 NAV3Q8IVL0 2385 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 SNED1Q8TER0 1413 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 CBY3A6NI87 242 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 FOXO6A8MYZ6 492 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 AKR1B15C9JRZ8 316 aaPredicted RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 EBAG9O00559 213 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 PRPF4O43172 522 aaKnown RBP eCLIP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 HSP90AB1P08238 724 aaKnown RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 MATR3P43243 847 aaKnown RBP eCLIP5.43□□□□□ -1.544e-7■■■■■ 28.5
CPSF6-206ENST00000550987 PMS2P54278 862 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 VCPP55072 806 aaKnown RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 TUBA4AP68366 448 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ACSM2AQ08AH3 577 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 PCLAFQ15004 111 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 PLEKHO1Q53GL0 409 aaPredicted RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ACSM2BQ68CK6 577 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ISM2Q6H9L7 571 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 JADE1Q6IE81 842 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 LCTLQ6UWM7 567 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF813Q6ZN06 617 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 FAM47EQ6ZV65 393 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 FAM57BQ71RH2 274 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 SERPINA11Q86U17 422 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 TRIM74Q86UV6 250 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 TRIM73Q86UV7 250 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 LINC00346Q8IVM7 164 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 LRRC57Q8N9N7 239 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 NSMCE1Q8WV22 266 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 LARP4BQ92615 738 aaKnown RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 MAP4K1Q92918 833 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 DCPSQ96C86 337 aaKnown RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ELMOD3Q96FG2 381 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 RSPH9Q9H1X1 276 aaPredicted RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 CDT1Q9H211 546 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ALDH8A1Q9H2A2 487 aaPredicted RBP5.43□□□□□ -1.54
CPSF6-206ENST00000550987 MAGEE1Q9HCI5 957 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ABI3Q9P2A4 366 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 SERGEFQ9UGK8 458 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ANGPTL2Q9UKU9 493 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 ZFHX3Q15911 3703 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 SH3TC1Q8TE82 1336 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 CEP295Q9C0D2 2601 aa5.43□□□□□ -1.54
CPSF6-206ENST00000550987 KDRP35968 1356 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 LRRC72A6NJI9 287 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 C2CD4BA6NLJ0 364 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HSPB2A8KAH6 182 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HCRTR2O43614 444 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 NHLRC4P0CG21 123 aaPredicted RBP5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ETFAP13804 333 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 PLA2G2AP14555 144 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 GLULP15104 373 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 CTPS1P17812 591 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 RYKP34925 604 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 TMPRSS3P57727 454 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 INHBEP58166 350 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ZBED6P86452 979 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 GRIK3Q13003 919 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 CAPSQ13938 189 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HSPB2Q16082 182 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 CXorf66Q5JRM2 361 aaPredicted RBP5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ENTPD8Q5MY95 495 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 PRAMEF19Q5SWL8 479 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 C1QTNF12Q5T7M4 302 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 MIS18BP1Q6P0N0 1132 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 FBXO42Q6P3S6 717 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ADGRA1Q86SQ6 560 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HAPLN4Q86UW8 402 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 SLC25A41Q8N5S1 370 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HORMAD2Q8N7B1 307 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 NKAIN3Q8N8D7 197 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 GPR150Q8NGU9 434 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 GSDMBQ8TAX9 411 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 SARAFQ96BY9 339 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 CLMNQ96JQ2 1002 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ABHD1Q96SE0 405 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 LHPPQ9H008 270 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 HRH4Q9H3N8 390 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 PDZD7Q9H5P4 517 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 ZWILCHQ9H900 591 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 SEL1LQ9UBV2 794 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 SEC63Q9UGP8 760 aaKnown RBP5.42□□□□□ -1.54
CPSF6-206ENST00000550987 NDRG3Q9UGV2 375 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 CEPT1Q9Y6K0 416 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 SLC4A4Q9Y6R1 1079 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 PFASO15067 1338 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 NPC1L1Q9UHC9 1359 aa5.42□□□□□ -1.54
CPSF6-206ENST00000550987 FREM2Q5SZK8 3169 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 LAMA5O15230 3695 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 LOC100509620A0A075B734 347 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 NBPF19A0A087WUL8 3843 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 OR2A25A4D2G3 310 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 FAM90A8PA6NJQ4 464 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 GLOD5A6NK44 160 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 EIF4E1BA6NMX2 242 aaKnown RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 CDRT15L2A8MXV6 281 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 C1QTNF3-AMACRE9PGA6 284 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms