RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CD48P09326 243 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 ZBED6P86452 979 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 ABHD18Q0P651 414 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 HGSNATQ68CP4 663 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 CCDC13Q8IYE1 715 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 BMPERQ8N8U9 685 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 ARRDC2Q8TBH0 407 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 CTTNBP2NLQ9P2B4 639 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 TBC1D29Q9UFV1 150 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 PRKAB1Q9Y478 270 aa22.84■■□□□ 1.25
SMARCD1-209ENST00000550477 GPR89AB7ZAQ6 455 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 GPR89BP0CG08 455 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 HENMT1Q5T8I9 393 aaKnown RBP22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 CPLX3Q8WVH0 158 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 SMIM14Q96QK8 99 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 CTRCQ99895 268 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 CPNE7Q9UBL6 633 aa22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 LUC7L2Q9Y383 392 aaKnown RBP22.83■■□□□ 1.25
SMARCD1-209ENST00000550477 NUAK1O60285 661 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 MTA2O94776 668 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 SLC25A14O95258 325 aaPredicted RBP22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 HLA-DQB2P05538 268 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 ARSEP51690 589 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 TLE1Q04724 770 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 SEPT6Q14141 434 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 HDAC11Q96DB2 347 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 SPATA16Q9BXB7 569 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 ZFYVE1Q9HBF4 777 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 UVRAGQ9P2Y5 699 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 KLHL3Q9UH77 587 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 ANAPC2Q9UJX6 822 aa22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 CNOT6Q9ULM6 557 aaKnown RBP22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 OAS3Q9Y6K5 1087 aaKnown RBP22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 TLN1Q9Y490 2541 aaKnown RBP22.82■■□□□ 1.24
SMARCD1-209ENST00000550477 A0A087X0T9 212 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 STK17BO94768 372 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 EML2O95834 649 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 H2AFZP0C0S5 128 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 FAM228BP0C875 321 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 CD86P42081 329 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 CLCNKAP51800 687 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 UBASH3AP57075 661 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 NIPAL4Q0D2K0 466 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 QPCTQ16769 361 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 ATP13A4Q4VNC1 1196 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 CCDC70Q6NSX1 233 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 H2AFVQ71UI9 128 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 PTRH1Q86Y79 214 aaKnown RBP22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 TRIM48Q8IWZ4 208 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 ESX1Q8N693 406 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 ZSCAN5AQ9BUG6 496 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 OSGEPL1Q9H4B0 414 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 TRIM39Q9HCM9 518 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 CAPN11Q9UMQ6 739 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 TMEM184BQ9Y519 407 aaPredicted RBP22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 PCDHB3Q9Y5E6 796 aa22.81■■□□□ 1.24
SMARCD1-209ENST00000550477 LILRA5A6NI73 299 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 NKX2-8O15522 239 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 PROSCO94903 275 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 VIPP01282 170 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 JCHAINP01591 159 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 AMD1P17707 334 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 TCN2P20062 427 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 ZNF569Q5MCW4 686 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 PDPK2PQ6A1A2 396 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 CYB5D1Q6P9G0 228 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 APOBEC4Q8WW27 367 aaKnown RBP22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 CTNNBL1Q8WYA6 563 aaPredicted RBP22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 SRPK1Q96SB4 655 aaKnown RBP22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 MAK16Q9BXY0 300 aaKnown RBP22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 UCK1Q9HA47 277 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 KLC4Q9NSK0 619 aa22.8■■□□□ 1.24
SMARCD1-209ENST00000550477 FADS2P1A8MWK0 482 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 PRKAR1AP10644 381 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 FANCCQ00597 558 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 FOXM1Q08050 763 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 CDC20Q12834 499 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 MAP7Q14244 749 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 INSCQ1MX18 579 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 CAVIN1Q6NZI2 390 aaKnown RBP22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 C9orf43Q8TAL5 461 aaPredicted RBP22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 FAF2Q96CS3 445 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 WDR24Q96S15 920 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 ANP32EQ9BTT0 268 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 SPRY4Q9C004 299 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 OR2AG1Q9H205 316 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 ATXN10Q9UBB4 475 aa22.79■■□□□ 1.24
SMARCD1-209ENST00000550477 LOC101059948A0A1B0GTJ6 334 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 KMOO15229 486 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 TOX3O15405 576 aaPredicted RBP22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 ANKRD34CP0C6C1 535 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 XRCC1P18887 633 aaPredicted RBP22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 GBE1Q04446 702 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 IQCB1Q15051 598 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 CRTC2Q53ET0 693 aaPredicted RBP22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 ODF2Q5BJF6 829 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 PRDM8Q9NQV8 689 aa22.78■■□□□ 1.24
SMARCD1-209ENST00000550477 A6NCN8 305 aa22.77■■□□□ 1.24
SMARCD1-209ENST00000550477 GOLGA6L19H0YKK7 550 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms