RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PCYT1BQ9Y5K3 369 aaPredicted RBP22.32■■□□□ 1.16
BRF1-216ENST00000550208 HEATR9A2RTY3 570 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 LMO7DNF2Z398 122 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 DNAJC6O75061 913 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 MTX2O75431 263 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 SRP72O76094 671 aaKnown RBP22.31■■□□□ 1.16
BRF1-216ENST00000550208 TMEM63AO94886 807 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 PRAMEF1O95521 474 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 LDOC1O95751 146 aaPredicted RBP22.31■■□□□ 1.16
BRF1-216ENST00000550208 ANXA6P08133 673 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 ZNF8P17098 575 aaPredicted RBP22.31■■□□□ 1.16
BRF1-216ENST00000550208 PSMA3P25788 255 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 HADHAP40939 763 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 KHDC1Q4VXA5 237 aaKnown RBP22.31■■□□□ 1.16
BRF1-216ENST00000550208 PYCR3Q53H96 274 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 DGLUCYQ7Z3D6 616 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 CAND1Q86VP6 1230 aaKnown RBP22.31■■□□□ 1.16
BRF1-216ENST00000550208 GDAP1Q8TB36 358 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 CDC6Q99741 560 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 OR2AG1Q9H205 316 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 FAM96AQ9H5X1 160 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 ASB8Q9H765 288 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 NLGN3Q9NZ94 848 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 BFARQ9NZS9 450 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 VPS18Q9P253 973 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 SLC2A6Q9UGQ3 507 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 ZNHIT2Q9UHR6 403 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 CDC23Q9UJX2 597 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 PRKAB1Q9Y478 270 aa22.31■■□□□ 1.16
BRF1-216ENST00000550208 TTI1O43156 1089 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 AVILO75366 819 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 TUBB4AP04350 444 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 MYF5P13349 255 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 IVDP26440 423 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 MGAT1P26572 445 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 MC4RP32245 332 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 ARSDP51689 593 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 CRADDP78560 199 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 MRPS25P82663 173 aaKnown RBP22.3■■□□□ 1.16
BRF1-216ENST00000550208 SARNPP82979 210 aaKnown RBP22.3■■□□□ 1.16
BRF1-216ENST00000550208 C2orf54Q08AI8 447 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 LAMB3Q13751 1172 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 ITGA9Q13797 1035 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 SKIDA1Q1XH10 827 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 PPM1JQ5JR12 505 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 PCID2Q5JVF3 399 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 TSTD2Q5T7W7 516 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 SYDE1Q6ZW31 735 aaPredicted RBP22.3■■□□□ 1.16
BRF1-216ENST00000550208 TAF8Q7Z7C8 310 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 JAMLQ86YT9 394 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 PHYKPLQ8IUZ5 450 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 MCUQ8NE86 351 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 CNDP2Q96KP4 475 aaKnown RBP22.3■■□□□ 1.16
BRF1-216ENST00000550208 ZNF778Q96MU6 729 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 TRIM51Q9BSJ1 452 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 CHRAC1Q9NRG0 131 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 FTSJ1Q9UET6 329 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 DOLKQ9UPQ8 538 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 TCAF1Q9Y4C2 921 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 ST14Q9Y5Y6 855 aa22.3■■□□□ 1.16
BRF1-216ENST00000550208 GOLGA8MH3BSY2 632 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 AP3B1O00203 1094 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 TPP1O14773 563 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 NUAK1O60285 661 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 ALPPL2P10696 532 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 CDKN1CP49918 316 aaPredicted RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 TMEM115Q12893 351 aaPredicted RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 RNASEH2BQ5TBB1 312 aaKnown RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 GKN2Q86XP6 184 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 NRROSQ86YC3 692 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 GALNT13Q8IUC8 556 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 NAT8LQ8N9F0 302 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 PPHLN1Q8NEY8 458 aaKnown RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 GPBAR1Q8TDU6 330 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 OR2M4Q96R27 311 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 RMI1Q9H9A7 625 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 TRNAU1APQ9NX07 287 aaKnown RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 SYBUQ9NX95 663 aa22.29■■□□□ 1.16
BRF1-216ENST00000550208 CNOT1A5YKK6 2376 aaKnown RBP22.29■■□□□ 1.16
BRF1-216ENST00000550208 DNAH14Q0VDD8 3507 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 H7C0S8 307 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 DNALI1O14645 258 aaPredicted RBP22.28■■□□□ 1.16
BRF1-216ENST00000550208 TNFSF14O43557 240 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 PRSS56P0CW18 603 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 AK4P27144 223 aaPredicted RBP22.28■■□□□ 1.16
BRF1-216ENST00000550208 SIM1P81133 766 aaPredicted RBP22.28■■□□□ 1.16
BRF1-216ENST00000550208 CTBSQ01459 385 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 DNAJC3Q13217 504 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 NFATC2Q13469 925 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 PROX2Q3B8N5 592 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 GPRC6AQ5T6X5 926 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 GLRX5Q86SX6 157 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 PPIL6Q8IXY8 311 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 SDR16C5Q8N3Y7 309 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 OR13J1Q8NGT2 312 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 HDAC10Q969S8 669 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 DUSP23Q9BVJ7 150 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 IL22Q9GZX6 179 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 SMOXQ9NWM0 555 aa22.28■■□□□ 1.16
BRF1-216ENST00000550208 RIMKLBQ9ULI2 386 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms