RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
LETMD1-221ENST00000550100 RBM44Q6ZP01 1051 aaKnown RBP11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ZNF438Q7Z4V0 828 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 SPRED1Q7Z699 444 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 PRUNE1Q86TP1 453 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ZNF547Q8IVP9 402 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 NAT14Q8WUY8 206 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ATG4AQ8WYN0 398 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 NXPE2Q96DL1 559 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 VAT1Q99536 393 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ANP32EQ9BTT0 268 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 FICDQ9BVA6 458 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 GSDMCQ9BYG8 508 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ASCL3Q9NQ33 180 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 IL17CQ9P0M4 197 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 GUCA1BQ9UMX6 200 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 KCNK6Q9Y257 313 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 ARL5AQ9Y689 179 aa11.69□□□□□ -0.54
LETMD1-221ENST00000550100 AHCTF1Q8WYP5 2266 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 A6NCN8 305 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 NUAK1O60285 661 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 TJP3O95049 919 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 ACP5P13686 325 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 EIF2S3P41091 472 aaKnown RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 ACTR1BP42025 376 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 LSSP48449 732 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 ACTR1AP61163 376 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 GABREP78334 506 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 MPP3Q13368 585 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 CHRNA6Q15825 494 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 COL28A1Q2UY09 1125 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 C3orf38Q5JPI3 329 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 USP53Q70EK8 1073 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 CHST15Q7LFX5 561 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 ZNF761Q86XN6 746 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 GALNT13Q8IUC8 556 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 KLHDC8BQ8IXV7 354 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 TRAM1L1Q8N609 369 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 FAM71DQ8N9W8 422 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 SLC35B2Q8TB61 432 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 BLOC1S5Q8TDH9 187 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 GLYATL1Q969I3 302 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 SEMA6CQ9H3T2 930 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 VPS18Q9P253 973 aa11.68□□□□□ -0.54
LETMD1-221ENST00000550100 NFKBIL1Q9UBC1 381 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-221ENST00000550100 A0A087WV48 116 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 PRAMEF33A0A0G2JMD5 474 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 PRR19A6NJB7 356 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 MIF4GDA9UHW6 222 aaKnown RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 D6RAR5 112 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 CHUKO15111 745 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 NUDT21O43809 227 aaKnown RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 TCEA3O75764 348 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 SLC25A14O95258 325 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 PYGLP06737 847 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 HGFP14210 728 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 PNLIPP16233 465 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 CD1CP29017 333 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 HMGCLP35914 325 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 ZFP36L1Q07352 338 aaKnown RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 SPIDRQ14159 915 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 TBC1D25Q3MII6 688 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 KCTD11Q693B1 232 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 CDKL3Q8IVW4 592 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 TAB3Q8N5C8 712 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 RNF10Q8N5U6 811 aaKnown RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 UBL4BQ8N7F7 174 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 GFM1Q96RP9 751 aaKnown RBP11.67□□□□□ -0.54
LETMD1-221ENST00000550100 NUDT22Q9BRQ3 303 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 TMEM121Q9BTD3 319 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 POLR1BQ9H9Y6 1135 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 RDH14Q9HBH5 336 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 TRIM39Q9HCM9 518 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 PRDM8Q9NQV8 689 aa11.67□□□□□ -0.54
LETMD1-221ENST00000550100 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 CCL22O00626 93 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 GRID2O43424 1007 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
LETMD1-221ENST00000550100 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 ALDH4A1P30038 563 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 GSDMDP57764 484 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 NR1D2Q14995 579 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-221ENST00000550100 PLA2G4EQ3MJ16 856 aa11.66□□□□□ -0.54
LETMD1-221ENST00000550100 AMZ1Q400G9 498 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms