RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ECEL1O95672 775 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 CEACAM5P06731 702 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 CD48P09326 243 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 NFKBIAP25963 317 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 VIPR1P32241 457 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 TAS2R40P59535 323 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 SLC10A7Q0GE19 358 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 MAP7Q14244 749 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 ACOX1Q15067 660 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
DDX54-206ENST00000549271 SLC34A3Q8N130 599 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 CTNNBL1Q8WYA6 563 aaPredicted RBP12.11□□□□□ -0.47
DDX54-206ENST00000549271 NUS1Q96E22 293 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 GSDMCQ9BYG8 508 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 FRMD8Q9BZ67 464 aaPredicted RBP12.11□□□□□ -0.47
DDX54-206ENST00000549271 FBXO8Q9NRD0 319 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
DDX54-206ENST00000549271 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 ZNHIT6Q9NWK9 470 aaKnown RBP12.11□□□□□ -0.47
DDX54-206ENST00000549271 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 PCDHB3Q9Y5E6 796 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 RPS6KL1Q9Y6S9 549 aa12.11□□□□□ -0.47
DDX54-206ENST00000549271 AKR1B15C9JRZ8 316 aaPredicted RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 PPM1DO15297 605 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 AKR1B10O60218 316 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 MAFKO60675 156 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 FUCA1P04066 466 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 TPM1P09493 284 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 MAN1A1P33908 653 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 CDH6P55285 790 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 DPTQ07507 201 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX54-206ENST00000549271 PEX6Q13608 980 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 INPP5JQ15735 1006 aaPredicted RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 CNGA3Q16281 694 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 NADK2Q4G0N4 442 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 NAGSQ8N159 534 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 ESX1Q8N693 406 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 PATE1Q8WXA2 126 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 MOCOSQ96EN8 888 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 DTD2Q96FN9 168 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 SCRN2Q96FV2 425 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 SCARF2Q96GP6 870 aaPredicted RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 CCDC42Q96M95 316 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 MCCC1Q96RQ3 725 aaPredicted RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 MGME1Q9BQP7 344 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 CARS2Q9HA77 564 aaKnown RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 APMAPQ9HDC9 416 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 RCOR3Q9P2K3 495 aaPredicted RBP12.1□□□□□ -0.47
DDX54-206ENST00000549271 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 SLC17A4Q9Y2C5 497 aa12.1□□□□□ -0.47
DDX54-206ENST00000549271 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
DDX54-206ENST00000549271 CPP00450 1065 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 IVLP07476 585 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 CYP2A6P11509 494 aaPredicted RBP12.09□□□□□ -0.47
DDX54-206ENST00000549271 PRF1P14222 555 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 LHCGRP22888 699 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 CDK3Q00526 305 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 ERV3-1Q14264 604 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 KRT81Q14533 505 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 ZNF235Q14590 738 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 ARHGAP22Q7Z5H3 698 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 NLRP8Q86W28 1048 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 TC2NQ8N9U0 490 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 TAAR2Q9P1P5 351 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 PCDHGC4Q9Y5F7 938 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 ST14Q9Y5Y6 855 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
DDX54-206ENST00000549271 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
DDX54-206ENST00000549271 TACC2O95359 2948 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 A8MX80 341 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 DNAJB5O75953 348 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 MTA2O94776 668 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 PGLSO95336 258 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 DLSTP36957 453 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 ETV3P41162 512 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 GPLD1P80108 840 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 TRAF2Q12933 501 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 MESDQ14696 234 aa12.08□□□□□ -0.48
DDX54-206ENST00000549271 PRR30Q53SZ7 412 aaPredicted RBP12.08□□□□□ -0.48
DDX54-206ENST00000549271 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms