RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ARHGAP25P42331 645 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 AP1B1Q10567 949 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 PDK1Q15118 436 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 SLC14A2Q15849 920 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ALS2CLQ60I27 953 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 TMEM71Q6P5X7 295 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 IYDQ6PHW0 289 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 BMPERQ8N8U9 685 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 GPR26Q8NDV2 337 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 CCDC112Q8NEF3 446 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 OR10G6Q8NH81 332 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 HTR3CQ8WXA8 447 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 EXTL1Q92935 676 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 AGAP3Q96P47 875 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 CARD9Q9H257 536 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ZFYVE1Q9HBF4 777 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNHIT6Q9NWK9 470 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ATXN10Q9UBB4 475 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 ZNF711Q9Y462 761 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 B3GALT1Q9Y5Z6 326 aa17.21■□□□□ 0.35
CHMP1A-205ENST00000548650 BOD1L1Q8NFC6 3051 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 BSNQ9UPA5 3926 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 B4E171 279 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 J3QKU1 62 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 PPP1R12AO14974 1030 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 GRID2O43424 1007 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC4A1P02730 911 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 F3P13726 295 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 TSPAN7P41732 249 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 NOP2P46087 812 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 NFATC2Q13469 925 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 JPH3Q8WXH2 748 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 NKD1Q969G9 470 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 AHCYL2Q96HN2 611 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 ZSCAN5AQ9BUG6 496 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC25A51Q9H1U9 297 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 ARFGAP3Q9NP61 516 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 OCIAD1Q9NX40 245 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 SHOC2Q9UQ13 582 aa17.2■□□□□ 0.34
CHMP1A-205ENST00000548650 KIR2DS5A0A0G2JLQ3 304 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 A0A0G2JNG1 304 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 EFCAB7A8K855 629 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 KIR2DS3K7RE56 304 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 ZNF8P17098 575 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 PTMSP20962 102 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 ATP1A2P50993 1020 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 EPHA4P54764 986 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 DYNLT1P63172 113 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 KIR2DS5Q14953 304 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 PCSK7Q16549 785 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 ZNF648Q5T619 568 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 WDR74Q6RFH5 385 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 B4GALNT4Q76KP1 1039 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 KDELC2Q7Z4H8 507 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 FAM129CQ86XR2 697 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 RFX6Q8HWS3 928 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 PHYKPLQ8IUZ5 450 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 TRAM1L1Q8N609 369 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 RNF25Q96BH1 459 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 CCDC42Q96M95 316 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 SPATA16Q9BXB7 569 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 OR2AG1Q9H205 316 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 MAGEE1Q9HCI5 957 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC39A1Q9NY26 324 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 HYOU1Q9Y4L1 999 aa17.19■□□□□ 0.34
CHMP1A-205ENST00000548650 LILRA5A6NI73 299 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 GPR89AB7ZAQ6 455 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SNX2O60749 519 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 MT-CYBP00156 380 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 GPR89BP0CG08 455 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC2A4P14672 509 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 ZFXP17010 805 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 PTPN3P26045 913 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 UGT1A3P35503 534 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC1A1P43005 524 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 CLCNKAP51800 687 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 RAB15P59190 212 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 UBE2IP63279 158 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 CYP4F2P78329 520 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 CDK18Q07002 472 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 PRKD1Q15139 912 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 TCEAL1Q15170 157 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 TAZQ16635 292 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 ANKS6Q68DC2 871 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 PDPK2PQ6A1A2 396 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 MFSD7Q6UXD7 560 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 ARHGAP22Q7Z5H3 698 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 ADGRG6Q86SQ4 1221 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SLC9B2Q86UD5 537 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 RHOT1Q8IXI2 618 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 ZSCAN1Q8NBB4 408 aa17.18■□□□□ 0.34
CHMP1A-205ENST00000548650 SPATA22Q8NHS9 363 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms