RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 ACAP2Q15057 778 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
LETMD1-210ENST00000547555 DLG2Q15700 870 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 DUSP6Q16828 381 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 RBM48Q5RL73 367 aaKnown RBP17.01■□□□□ 0.31
LETMD1-210ENST00000547555 BSPRYQ5W0U4 402 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 LARP4Q71RC2 724 aaKnown RBP eCLIP17.01■□□□□ 0.314e-6■■■□□ 17.7
LETMD1-210ENST00000547555 Q7L0L9 218 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 ACOT1Q86TX2 421 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
LETMD1-210ENST00000547555 CBR4Q8N4T8 237 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 CANT1Q8WVQ1 401 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 L3HYPDHQ96EM0 354 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 MFSD3Q96ES6 412 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 CCDC138Q96M89 665 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 SLC2A13Q96QE2 648 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 WDR12Q9GZL7 423 aaKnown RBP17.01■□□□□ 0.31
LETMD1-210ENST00000547555 PCDHAC1Q9H158 963 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 CAB39LQ9H9S4 337 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 TMLHEQ9NVH6 421 aa17.01■□□□□ 0.31
LETMD1-210ENST00000547555 RNF103-CHMP3A0A140T963 221 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 MYBPHLA2RUH7 354 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 SAC3D1A6NKF1 404 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 KATNA1O75449 491 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 ANXA9O76027 345 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 CLPXO76031 633 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 BCL10O95999 233 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 MBL2P11226 248 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 CPB1P15086 417 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 MSX2P35548 267 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 HALP42357 657 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 SULT1E1P49888 294 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 GABARAPL2P60520 117 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 ZNF846Q147U1 533 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 FXNQ16595 210 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 BROXQ5VW32 411 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 TPGS2Q68CL5 300 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 KIAA0930Q6ICG6 404 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 LILRA6Q6PI73 481 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 CCDC80Q76M96 950 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 PCDH20Q8N6Y1 951 aaKnown RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 C12orf29Q8N999 325 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 C2CD4AQ8NCU7 369 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 ZNF461Q8TAF7 563 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 KCTD4Q8WVF5 259 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 ACDQ96AP0 544 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 UBXN10Q96LJ8 280 aa17■□□□□ 0.31
LETMD1-210ENST00000547555 ZNF641Q96N77 438 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 GAS2L1Q99501 681 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 CDCA3Q99618 268 aaPredicted RBP17■□□□□ 0.31
LETMD1-210ENST00000547555 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 MTMR11A4FU01 709 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 HTR3EA5X5Y0 456 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 SUPT7LO94864 414 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 VNN2O95498 520 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 HPRP00739 348 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 TCN1P20061 433 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 GRIA3P42263 894 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 CLCN4P51793 760 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 CLCN5P51795 746 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 ADARB1P78563 741 aaKnown RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 TOP3AQ13472 1001 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 NFE2Q16621 373 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 ARL13BQ3SXY8 428 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 SLC39A12Q504Y0 691 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 TECRLQ5HYJ1 363 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 TFAP2DQ7Z6R9 452 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 HMGCLL1Q8TB92 370 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 C2orf15Q8WU43 125 aaKnown RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 GUCD1Q96NT3 240 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 NEURL2Q9BR09 285 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 BDH2Q9BUT1 245 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 MROQ9BYG7 248 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 POLR1BQ9H9Y6 1135 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 LIN28AQ9H9Z2 209 aaKnown RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 AFF4Q9UHB7 1163 aaKnown RBP16.99■□□□□ 0.31
LETMD1-210ENST00000547555 MAFFQ9ULX9 164 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 PATJQ8NI35 1801 aa16.99■□□□□ 0.31
LETMD1-210ENST00000547555 ZNF839A8K0R7 811 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 F9P00740 461 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 AHSGP02765 367 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 CKMT2P17540 419 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 TFE3P19532 575 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-210ENST00000547555 IMPDH1P20839 514 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 MAP4P27816 1152 aaKnown RBP16.98■□□□□ 0.31
LETMD1-210ENST00000547555 BMXP51813 675 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 SLC7A2P52569 658 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 ARPP19P56211 112 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 EEFSECP57772 596 aaKnown RBP16.98■□□□□ 0.31
LETMD1-210ENST00000547555 PMS2P3Q13401 168 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 KCNC3Q14003 757 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 TCEAL5Q5H9L2 206 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 TSTD2Q5T7W7 516 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 CES3Q6UWW8 571 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 CUZD1Q86UP6 607 aa16.98■□□□□ 0.31
LETMD1-210ENST00000547555 PROSER1Q86XN7 944 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms