RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SMIM1B2RUZ4 78 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 FAM90A26D6RGX4 464 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 BLOC1S5-TXNDC5H3BN57 136 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 NCAM2O15394 837 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 KCNN4O15554 427 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 PCDH7O60245 1069 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 IL7RP16871 459 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 UGT1A1P22309 533 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 ABCD3P28288 659 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 UBA7P41226 1012 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 PAFAH1B1P43034 410 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 AMPHP49418 695 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 TUBP50607 506 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 GNB1P62873 340 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 COG7P83436 770 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 NEXNQ0ZGT2 675 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 OLIG2Q13516 323 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 LPAL2Q16609 132 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 SFMBT2Q5VUG0 894 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 OR14L1PQ8NHC6 308 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 NFKBIDQ8NI38 313 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 FCAMRQ8WWV6 532 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 SCLT1Q96NL6 688 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 PRKRIP1Q9H875 184 aaPredicted RBP3.87□□□□□ -1.79
CCDC38-204ENST00000546816 UPF2Q9HAU5 1272 aaKnown RBP3.87□□□□□ -1.79
CCDC38-204ENST00000546816 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 TCP11L1Q9NUJ3 509 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 SAGE1Q9NXZ1 904 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 LUZP4Q9P127 313 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 ABI3Q9P2A4 366 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 MKLN1Q9UL63 735 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 KDM3AQ9Y4C1 1321 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 M0QZ24 198 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 ANKRD28O15084 1053 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 HOXC9P31274 260 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 AHRP35869 848 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 ARL1P40616 181 aaPredicted RBP3.86□□□□□ -1.79
CCDC38-204ENST00000546816 PLIN5Q00G26 463 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 KRTCAP3Q53RY4 240 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 LCN10Q6JVE6 187 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 APLFQ8IW19 511 aaPredicted RBP3.86□□□□□ -1.79
CCDC38-204ENST00000546816 ADSSL1Q8N142 457 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 STPG4Q8N801 248 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 RBM15BQ8NDT2 890 aaKnown RBP3.86□□□□□ -1.79
CCDC38-204ENST00000546816 TMEM190Q8WZ59 177 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 ST8SIA4Q92187 359 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 TM9SF4Q92544 642 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF599Q96NL3 588 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 EGFL8Q99944 293 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 FSD1Q9BTV5 496 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 USP44Q9H0E7 712 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 LRMDAQ9H2I8 198 aa3.86□□□□□ -1.79
CCDC38-204ENST00000546816 MAP3K20Q9NYL2 800 aaKnown RBP3.86□□□□□ -1.79
CCDC38-204ENST00000546816 MARCH4Q9P2E8 410 aaPredicted RBP3.86□□□□□ -1.79
CCDC38-204ENST00000546816 CCDC196A0A1B0GTZ2 297 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 CRLF1O75462 422 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 PYGLP06737 847 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 ERVK-10P10266 1014 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF23P17027 643 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 EPHA8P29322 1005 aaPredicted RBP3.85□□□□□ -1.79
CCDC38-204ENST00000546816 CTCFP49711 727 aaPredicted RBP3.85□□□□□ -1.79
CCDC38-204ENST00000546816 MYLK3Q32MK0 819 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 CDONQ4KMG0 1287 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 TECRLQ5HYJ1 363 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 INO80CQ6PI98 192 aaPredicted RBP3.85□□□□□ -1.79
CCDC38-204ENST00000546816 SH2D6Q7Z4S9 175 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 SAAL1Q96ER3 474 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
CCDC38-204ENST00000546816 STAMBPL1Q96FJ0 436 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 DCTN5Q9BTE1 182 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 SLC28A3Q9HAS3 691 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 KLHL9Q9P2J3 617 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 GJD2Q9UKL4 321 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 PRAG1Q86YV5 1406 aa3.85□□□□□ -1.79
CCDC38-204ENST00000546816 C1orf226A1L170 272 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 OR5K3A6NET4 321 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 HS3ST1O14792 307 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 TGFB1I1O43294 461 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 WISP2O76076 250 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 MLYCDO95822 493 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 UBA1P22314 1058 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 ICAM3P32942 547 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 EIF3BP55884 814 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 LMO4P61968 165 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 MAD2L1Q13257 205 aaPredicted RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 FAM53AQ6NSI3 398 aaPredicted RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 CDC73Q6P1J9 531 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 PAPD4Q6PIY7 484 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 TSSK4Q6SA08 328 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 C15orf39Q6ZRI6 1047 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 PLEKHM3Q6ZWE6 761 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 ANO5Q75V66 913 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 PIWIL4Q7Z3Z4 852 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 ADAD2Q8NCV1 583 aaKnown RBP3.84□□□□□ -1.79
CCDC38-204ENST00000546816 PHF21AQ96BD5 680 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 TMEM68Q96MH6 324 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 CNOT8Q9UFF9 292 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms