RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 VPS18Q9P253 973 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 SLC30A1Q9Y6M5 507 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 TMEM131Q92545 1883 aa16.67■□□□□ 0.26
LTBR-215ENST00000546296 SPAARA0A1B0GVQ0 90 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 MROH6A6NGR9 719 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 YY2O15391 372 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 SIGLEC6O43699 453 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 FUCA1P04066 466 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 CELA2BP08218 269 aaPredicted RBP16.66■□□□□ 0.26
LTBR-215ENST00000546296 MC4RP32245 332 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 MAGEA6P43360 314 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 SIM1P81133 766 aaPredicted RBP16.66■□□□□ 0.26
LTBR-215ENST00000546296 CKAP4Q07065 602 aaKnown RBP16.66■□□□□ 0.26
LTBR-215ENST00000546296 ILF3Q12906 894 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBR-215ENST00000546296 GTF2H3Q13889 308 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 PCID2Q5JVF3 399 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 LDLRAP1Q5SW96 308 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 ANKRD22Q5VYY1 191 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 PPIL6Q8IXY8 311 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 SDR16C5Q8N3Y7 309 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 OR2M4Q96R27 311 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 RANBP9Q96S59 729 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 C19orf43Q9BQ61 176 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 RMI1Q9H9A7 625 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 TRNAU1APQ9NX07 287 aaKnown RBP16.66■□□□□ 0.26
LTBR-215ENST00000546296 ATXN10Q9UBB4 475 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
LTBR-215ENST00000546296 GOLGA8MH3BSY2 632 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 GAPDHSO14556 408 aaPredicted RBP16.65■□□□□ 0.26
LTBR-215ENST00000546296 TPP1O14773 563 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 TNFSF14O43557 240 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 VEGFDO43915 354 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 MTX2O75431 263 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 CDK14O94921 469 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ZNF8P17098 575 aaPredicted RBP16.65■□□□□ 0.26
LTBR-215ENST00000546296 ITGALP20701 1170 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 MGAT1P26572 445 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 DAB2P98082 770 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 XIAPP98170 497 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 DHX34Q14147 1143 aaKnown RBP16.65■□□□□ 0.26
LTBR-215ENST00000546296 PYCR3Q53H96 274 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ZRANB3Q5FWF4 1079 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 TSTD2Q5T7W7 516 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 LVRNQ6Q4G3 990 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 TAS2R42Q7RTR8 314 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 PCGF5Q86SE9 256 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ADGRG6Q86SQ4 1221 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 JAMLQ86YT9 394 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 FAM46DQ8NEK8 389 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 GLMNQ92990 594 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ULK4Q96C45 1275 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
LTBR-215ENST00000546296 CDKN2AIPNLQ96HQ2 116 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 GSDMCQ9BYG8 508 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ZCCHC2Q9C0B9 1178 aaKnown RBP16.65■□□□□ 0.26
LTBR-215ENST00000546296 IL22Q9GZX6 179 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 FAM96AQ9H5X1 160 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 CRLS1Q9UJA2 301 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 CDC23Q9UJX2 597 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 TMPRSS11EQ9UL52 423 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 PRKAB1Q9Y478 270 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
LTBR-215ENST00000546296 ASCC3Q8N3C0 2202 aaKnown RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 TTI1O43156 1089 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GPR39O43194 453 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GRID2O43424 1007 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 NUAK1O60285 661 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 AVILO75366 819 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GIMD1P0DJR0 217 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 MSH3P20585 1137 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 AKT1P31749 480 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 CRADDP78560 199 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 TMEM115Q12893 351 aaPredicted RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 NFATC2Q13469 925 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 PEX6Q13608 980 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 CCDC157Q569K6 752 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GPRC6AQ5T6X5 926 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 IZUMO3Q5VZ72 239 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 ZCCHC8Q6NZY4 707 aaKnown RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 CASC4Q6P4E1 433 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 CHST15Q7LFX5 561 aaPredicted RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 MAATS1Q7Z4T9 603 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 SNX20Q7Z614 316 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 MCUQ8NE86 351 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 CCL4L1Q8NHW4 92 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 BAHD1Q8TBE0 780 aaPredicted RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 DCUN1D1Q96GG9 259 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 XAB2Q9HCS7 855 aaKnown RBP16.64■□□□□ 0.25
LTBR-215ENST00000546296 CHRAC1Q9NRG0 131 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 EVA1BQ9NVM1 165 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GULP1Q9UBP9 304 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GPR34Q9UPC5 381 aa16.64■□□□□ 0.25
LTBR-215ENST00000546296 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 H7C0S8 307 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
LTBR-215ENST00000546296 DNAJC6O75061 913 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 TMEM63AO94886 807 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
LTBR-215ENST00000546296 MLNP12872 115 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms