RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 HM13Q8TCT9 377 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 BRSK1Q8TDC3 778 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 GPR21Q99679 349 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 RNF208Q9H0X6 261 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 SGK2Q9HBY8 427 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 DTLQ9NZJ0 730 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 INSIG1O15503 277 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 MPZL2O60487 215 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 NBNO60934 754 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 PTGER3P43115 390 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 RPS6KA3P51812 740 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GDF10P55107 478 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 SMAD5Q99717 465 aaKnown RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GATA5Q9BWX5 397 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 SLC27A6Q9Y2P4 619 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 CCDC182A6NF36 153 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 OR10H3O60404 316 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 EOMESO95936 686 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 LYNP07948 512 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 NMBRP28336 390 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 NDUFAF6Q330K2 333 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 UBASH3BQ8TF42 649 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 KCTD13Q8WZ19 329 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF599Q96NL3 588 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 PADI3Q9ULW8 664 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 NR2E1Q9Y466 385 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 FGBP02675 491 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 FABP3P05413 133 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 LIPEQ05469 1076 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 DENND5AQ6IQ26 1287 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 SPPL2CQ8IUH8 684 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GJD3Q8N144 294 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 RERGQ96A58 199 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 FEM1CQ96JP0 617 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 AIF1LQ9BQI0 150 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF780BQ9Y6R6 833 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 THRBP10828 461 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 DSC2Q02487 901 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 LGALS3BPQ08380 585 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 PRKD1Q15139 912 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 DCAF12L1Q5VU92 463 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 MFSD3Q96ES6 412 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 LENG8Q96PV6 779 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ALG2Q9H553 416 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 TFB2MQ9H5Q4 396 aaKnown RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 MOXD2PA6NHM9 499 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 C1RP00736 705 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF37AP17032 561 aaPredicted RBP12.45□□□□□ -0.42
COL4A6-209ENST00000545689 BMP7P18075 431 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 OR1D2P34982 312 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 CLCNKBP51801 687 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GTF2H2Q13888 395 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GTF2H2CQ6P1K8 395 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 COLGALT2Q8IYK4 626 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
COL4A6-209ENST00000545689 TREHO43280 583 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 TSC22D2O75157 780 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 C8GP07360 202 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 MYL9P24844 172 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 HTR1BP28222 390 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 C17orf64Q86WR6 236 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 DCAKDQ8WVC6 231 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 POLE3Q9NRF9 147 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 ZSCAN32Q9NX65 697 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 SUCOQ9UBS9 1254 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PCDHGB3Q9Y5G1 929 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 NR2F6P10588 404 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CAPGP40121 348 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 CLK3P49761 638 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 DUSP4Q13115 394 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 QPRTQ15274 297 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PTCHD4Q6ZW05 846 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 AHCYL2Q96HN2 611 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 NEK6Q9HC98 313 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 GOT2P00505 430 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 SMPD1P17405 629 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 IGFBP5P24593 272 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 RPS9P46781 194 aaKnown RBP12.44□□□□□ -0.42
COL4A6-209ENST00000545689 PRKAG1P54619 331 aa12.44□□□□□ -0.42
COL4A6-209ENST00000545689 GCNT6Q5T4J0 391 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms