RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ACOX2Q99424 681 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 PCGF1Q9BSM1 259 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 KIF9Q9HAQ2 790 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 ASAH2Q9NR71 780 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 MAP3K20Q9NYL2 800 aaKnown RBP4.45□□□□□ -1.7
SNHG1-224ENST00000545688 FBXL2Q9UKC9 423 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 ACSL5Q9ULC5 683 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
SNHG1-224ENST00000545688 PTPRGP23470 1445 aa4.45□□□□□ -1.7
SNHG1-224ENST00000545688 TOP2BQ02880 1626 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 A0A1B0GU03 582 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 EIF3DO15371 548 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 HOXC11O43248 304 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SYNGR3O43761 229 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 TBX6O95947 436 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 INHBAP08476 426 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 PATE4P0C8F1 98 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 APOBEC1P41238 236 aaKnown RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 CTCFP49711 727 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 TAF6P49848 677 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 CLDN20P56880 219 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 PMP22Q01453 160 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 PPIGQ13427 754 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SLC9C2Q5TAH2 1124 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 C18orf63Q68DL7 685 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SLC27A1Q6PCB7 646 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 ZNF704Q6ZNC4 412 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 CACNA2D4Q7Z3S7 1137 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 MAP7D3Q8IWC1 876 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 ZNF485Q8NCK3 441 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 THAP6Q8TBB0 222 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SLC44A1Q8WWI5 657 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 HTRA1Q92743 480 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 IGSF8Q969P0 613 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SCRN2Q96FV2 425 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 TFB2MQ9H5Q4 396 aaKnown RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 SLC28A3Q9HAS3 691 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 POLG2Q9UHN1 485 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 INTS6Q9UL03 887 aaKnown RBP4.44□□□□□ -1.7
SNHG1-224ENST00000545688 CAPN7Q9Y6W3 813 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 KDM5BQ9UGL1 1544 aa4.44□□□□□ -1.7
SNHG1-224ENST00000545688 TSPOAP1O95153 1857 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 MAP3K4Q9Y6R4 1608 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 RRN3P2A6NIE6 340 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 BLOC1S5-TXNDC5H3BN57 136 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 PRKNO60260 465 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-224ENST00000545688 F9P00740 461 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 IL7RP16871 459 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 ABCD3P28288 659 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 PIP4K2AP48426 406 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-224ENST00000545688 CCT5P48643 541 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 HSD17B4P51659 736 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 COG7P83436 770 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 PLIN5Q00G26 463 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 GRIK2Q13002 908 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 SFMBT2Q5VUG0 894 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 ATF7IPQ6VMQ6 1270 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 TM9SF4Q92544 642 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 GTF3C6Q969F1 213 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 STAMBPL1Q96FJ0 436 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 FSD1Q9BTV5 496 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 LTB4R2Q9NPC1 389 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 ZNF624Q9P2J8 865 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-224ENST00000545688 HAO1Q9UJM8 370 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 MKLN1Q9UL63 735 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 CAMK2AQ9UQM7 478 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 KIAA1210Q9ULL0 1709 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 PTPRMP28827 1452 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 TEX14Q8IWB6 1497 aa4.43□□□□□ -1.7
SNHG1-224ENST00000545688 TNIKQ9UKE5 1360 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 MAGI3Q5TCQ9 1506 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 HS3ST1O14792 307 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 NCAM2O15394 837 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 CTSVO60911 334 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 RNF224P0DH78 156 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 ARL1P40616 181 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 UBA7P41226 1012 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 KRT71Q3SY84 523 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 CXorf66Q5JRM2 361 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 WDR38Q5JTN6 314 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 ADSSL1Q8N142 457 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 STPG4Q8N801 248 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 NFKBIDQ8NI38 313 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 PSPC1Q8WXF1 523 aaKnown RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 ST8SIA4Q92187 359 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 SAAL1Q96ER3 474 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 RRNAD1Q96FB5 475 aaKnown RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 NEUROD6Q96NK8 337 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 MOV10L1Q9BXT6 1211 aaKnown RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 ABI3Q9P2A4 366 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 MARCH4Q9P2E8 410 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-224ENST00000545688 MMP24Q9Y5R2 645 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 CYP46A1Q9Y6A2 500 aa4.42□□□□□ -1.7
SNHG1-224ENST00000545688 DISP3Q9P2K9 1392 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 UACAQ9BZF9 1416 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 IGKV3D-15A0A087WSY6 115 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 FAM237AA0A1B0GTK4 181 aa4.41□□□□□ -1.7
SNHG1-224ENST00000545688 CCDC196A0A1B0GTZ2 297 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms