RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CD3EAPO15446 510 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 DYNC1LI2O43237 492 aaPredicted RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 SUPT3HO75486 399 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CRCPO75575 148 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SLC22A3O75751 556 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CYP11A1P05108 521 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 THP07101 528 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 LINC00032P0C843 101 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 BDNFP23560 247 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 IGFBP6P24592 240 aaPredicted RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 HRH2P25021 359 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 GSTM2P28161 218 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ETFBP38117 255 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CLCNKBP51801 687 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 POLR2JP52435 117 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 ERVK-8P63133 956 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 IRF5Q13568 498 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 TYSND1Q2T9J0 566 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 RABL3Q5HYI8 236 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ANKS6Q68DC2 871 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 TAF2Q6P1X5 1199 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 FBXO39Q8N4B4 442 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DNAJB14Q8TBM8 379 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 HDAC2Q92769 488 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 ISG20Q96AZ6 181 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 BIRC7Q96CA5 298 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 NSMCE2Q96MF7 247 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ZNF599Q96NL3 588 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 KCNA7Q96RP8 456 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 TMEM209Q96SK2 561 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 PKMYT1Q99640 499 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 AARSD1Q9BTE6 412 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 CHID1Q9BWS9 393 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 NAA50Q9GZZ1 169 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 FANCEQ9HB96 536 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 HPS4Q9NQG7 708 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ERGIC3Q9Y282 383 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 TIMM13Q9Y5L4 95 aaPredicted RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 HS3ST4Q9Y661 456 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 H0Y858 1186 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 K7EPI3 171 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 HAS3O00219 553 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 IFRD1O00458 451 aaPredicted RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 PPP6CO00743 305 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 RPP40O75818 363 aaKnown RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 MLYCDO95822 493 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 C1RP00736 705 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 SLC4A1P02730 911 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 ALPLP05186 524 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 FGF1P05230 155 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 TFPTP0C1Z6 253 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 RAP2AP10114 183 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 UROSP10746 265 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 THRBP10828 461 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 HLA-DPA1P20036 260 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 MATN1P21941 496 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 PAX3P23760 479 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 EEF1DP29692 281 aaKnown RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 DIO3P55073 304 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 YBX1P67809 324 aaKnown RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 TRAF2Q12933 501 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 NR1D2Q14995 579 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 PAGE3Q5JUK9 113 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 XAF1Q6GPH4 301 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 THAP5Q7Z6K1 395 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 LDB1Q86U70 411 aaPredicted RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 IFNEQ86WN2 208 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 METTL23Q86XA0 190 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 HID1Q8IV36 788 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 CPNE9Q8IYJ1 553 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 C3orf58Q8NDZ4 430 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 CASP10Q92851 521 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 AURKBQ96GD4 344 aaPredicted RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 GLT1D1Q96MS3 346 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 NSUN5Q96P11 429 aaKnown RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 BCL7BQ9BQE9 202 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 TINF2Q9BSI4 451 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 MTG1Q9BT17 334 aaPredicted RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 ING2Q9H160 280 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 NANOGQ9H9S0 305 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 SP110Q9HB58 689 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 TLR9Q9NR96 1032 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 BTRCQ9Y297 605 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 CRYL1Q9Y2S2 319 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 TTC3P53804 2025 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 LCHNA4D1U4 455 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 SUPT3HB4E1H0 165 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 C9JVG2 144 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 H3BMM5 538 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 KLK8O60259 260 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 SNX2O60749 519 aa8.69□□□□□ -1.02
TDP1-204ENST00000545686 GOT2P00505 430 aaKnown RBP8.69□□□□□ -1.02
TDP1-204ENST00000545686 FUCA1P04066 466 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms