RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 HEPHQ9BQS7 1158 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NUDT22Q9BRQ3 303 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SPRY4Q9C004 299 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CUEDC2Q9H467 287 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 IPPKQ9H8X2 491 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 APOBEC3GQ9HC16 384 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PRDM7Q9NQW5 492 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 FBXO8Q9NRD0 319 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CISHQ9NSE2 258 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SAMD15Q9P1V8 674 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PPARGC1AQ9UBK2 798 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PNMA8BQ9ULN7 279 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DAAM1Q9Y4D1 1078 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 RPS6KL1Q9Y6S9 549 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 X6R8D5 127 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 MYH11P35749 1972 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NUMA1Q14980 2115 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DOPEY1Q5JWR5 2465 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 LRRK2Q5S007 2527 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CXorf51AA0A1B0GTR3 108 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 FITM1A5D6W6 292 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 C16orf96A6NNT2 1141 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 FAM47E-STBD1D6RA91 191 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TULP2O00295 520 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CACNB4O00305 520 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 POLR1CO15160 346 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MAPK13O15264 365 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 B4GAT1O43505 415 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 DIAPH2O60879 1101 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 RHOBTB3O94955 611 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 WNT11O96014 354 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 HPXP02790 462 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 RHOCP08134 193 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 VDRP11473 427 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 KRT13P13646 458 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CD1EP15812 388 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CAPN3P20807 821 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 RRM1P23921 792 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 GRK2P25098 689 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CD1CP29017 333 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CCR1P32246 355 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 GRK3P35626 688 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 GDNFP39905 211 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 STAT1P42224 750 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 NUMBP49757 651 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MECP2P51608 486 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 HK2P52789 917 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CDH4P55283 916 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 OR1D5P58170 312 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 DLG4P78352 724 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MC2RQ01718 297 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ZRSR2Q15696 482 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ZNF805Q5CZA5 627 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CARD16Q5EG05 197 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ATP1A1-AS1Q5TC04 95 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 RETSATQ6NUM9 610 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 GALNT18Q6P9A2 607 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CYB5D1Q6P9G0 228 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CEP128Q6ZU80 1094 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 UNC13DQ70J99 1090 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 INTS8Q75QN2 995 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 STRA8Q7Z7C7 330 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 SETD3Q86TU7 594 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 SLC47A2Q86VL8 602 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CIR1Q86X95 450 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 IQCKQ8N0W5 287 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MMP21Q8N119 569 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 POU5F2Q8N7G0 328 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 BMPERQ8N8U9 685 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TP53I13Q8NBR0 393 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CHST14Q8NCH0 376 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 OR56A4Q8NGH8 313 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 FBXW5Q969U6 566 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TSACCQ96A04 125 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 FAM149B1Q96BN6 582 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 AHCYL2Q96HN2 611 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 PRMT1Q99873 361 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TWSG1Q9GZX9 223 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MAGEF1Q9HAY2 307 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM8AQ9HCN3 771 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 MLXIPLQ9NP71 852 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CHST11Q9NPF2 352 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ACSS2Q9NR19 701 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 OCIAD1Q9NX40 245 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 RRN3Q9NYV6 651 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 PDP2Q9P2J9 529 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 IMPACTQ9P2X3 320 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 XPO7Q9UIA9 1087 aaKnown RBP4.09□□□□□ -1.75
SNHG1-220ENST00000544550 VPS51Q9UID3 782 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 CROTQ9UKG9 612 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ADAMTS6Q9UKP5 1117 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 TBC1D30Q9Y2I9 924 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 ATP8A1Q9Y2Q0 1164 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 PCDHGA6Q9Y5G7 932 aa4.09□□□□□ -1.75
SNHG1-220ENST00000544550 SRPRBQ9Y5M8 271 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms