RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BLKP51451 505 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 SARNPP82979 210 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 ACVR1Q04771 509 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 NFATC2Q13469 925 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 ITGA9Q13797 1035 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 SUZ12Q15022 739 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 PCID2Q5JVF3 399 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 ADGRG6Q86SQ4 1221 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 MPP5Q8N3R9 675 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 PPHLN1Q8NEY8 458 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 ZNF398Q8TD17 642 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 SETD7Q8WTS6 366 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 CDKN2AIPNLQ96HQ2 116 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 TBATAQ96M53 351 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 RTKNQ9BST9 563 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 TRIM31Q9BZY9 425 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 IL22Q9GZX6 179 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 TMEM168Q9H0V1 697 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 FAM96AQ9H5X1 160 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 CARS2Q9HA77 564 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 XAB2Q9HCS7 855 aaKnown RBP14.95□□□□□ -0.02
CD9-210ENST00000543916 SMOXQ9NWM0 555 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 BFARQ9NZS9 450 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 VPS18Q9P253 973 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 ATXN10Q9UBB4 475 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 SPASTQ9UBP0 616 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 RIMKLBQ9ULI2 386 aa14.95□□□□□ -0.02
CD9-210ENST00000543916 FAM187AA6NFU0 413 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 OR51F1A6NGY5 319 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 FFAR2O15552 330 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 DNAJC6O75061 913 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 CBFA2T3O75081 653 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 PRSS56P0CW18 603 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 MLNP12872 115 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 CTSEP14091 401 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 ZNF8P17098 575 aaPredicted RBP14.94□□□□□ -0.02
CD9-210ENST00000543916 SDHBP21912 280 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 GRK6P43250 576 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 RPL21P46778 160 aaKnown RBP14.94□□□□□ -0.02
CD9-210ENST00000543916 CDKN1CP49918 316 aaPredicted RBP14.94□□□□□ -0.02
CD9-210ENST00000543916 LAMB3Q13751 1172 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 TUBB2AQ13885 445 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 SKIDA1Q1XH10 827 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 GPRC6AQ5T6X5 926 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 PCGF5Q86SE9 256 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 AGGF1Q8N302 714 aaeCLIP14.94□□□□□ -0.02
CD9-210ENST00000543916 EID2Q8N6I1 236 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 DDHD1Q8NEL9 900 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 DEFB124Q8NES8 71 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 CCL4L1Q8NHW4 92 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 BAHD1Q8TBE0 780 aaPredicted RBP14.94□□□□□ -0.02
CD9-210ENST00000543916 SNF8Q96H20 258 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 TUBB2BQ9BVA1 445 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 OR2AG1Q9H205 316 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 ASB8Q9H765 288 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 TRIM39Q9HCM9 518 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 PRKAB1Q9Y478 270 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 CSNK1G3Q9Y6M4 447 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 KNL1Q8NG31 2342 aa14.94□□□□□ -0.02
CD9-210ENST00000543916 DCDC2BA2VCK2 349 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 CCDC162PA2VCL2 907 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 TRIM38O00635 465 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 TP73O15350 636 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 NUAK1O60285 661 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 SEC31AO94979 1220 aaKnown RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 ITGALP20701 1170 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 NMBRP28336 390 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 DEFB133Q30KQ1 61 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 INAVAQ3KP66 663 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 PYCR3Q53H96 274 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 ZRANB3Q5FWF4 1079 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 HIBCHQ6NVY1 386 aaPredicted RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 NLRP9Q7RTR0 991 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 MAATS1Q7Z4T9 603 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 SNX20Q7Z614 316 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 FSTL5Q8N475 847 aaPredicted RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 OR4C6Q8NH72 309 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 GDAP1Q8TB36 358 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 RHBDD1Q8TEB9 315 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 HDAC10Q969S8 669 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 CCDC97Q96F63 343 aaPredicted RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 OR2M4Q96R27 311 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 KIFC1Q9BW19 673 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 TREX1Q9NSU2 369 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 SOX13Q9UN79 622 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 SNX24Q9Y343 169 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 PLEKHM1Q9Y4G2 1056 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 SLC30A1Q9Y6M5 507 aa14.93□□□□□ -0.02
CD9-210ENST00000543916 ZFC3H1O60293 1989 aaKnown RBP14.93□□□□□ -0.02
CD9-210ENST00000543916 PTPRZ1P23471 2315 aaPredicted RBP14.92□□□□□ -0.02
CD9-210ENST00000543916 CEP250Q9BV73 2442 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 TRBV5-4A0A0C4DH59 114 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 LMO7DNF2Z398 122 aa14.92□□□□□ -0.02
CD9-210ENST00000543916 GIPC1O14908 333 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms