RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 FAM207AQ9NSI2 230 aaPredicted RBP18.05■□□□□ 0.48
RAP1B-229ENST00000543393 SAMSN1Q9NSI8 373 aaKnown RBP18.05■□□□□ 0.48
RAP1B-229ENST00000543393 PCSK1NQ9UHG2 260 aa18.05■□□□□ 0.48
RAP1B-229ENST00000543393 PCDHGA9Q9Y5G4 932 aaKnown RBP18.05■□□□□ 0.48
RAP1B-229ENST00000543393 ABCA12Q86UK0 2595 aa18.05■□□□□ 0.48
RAP1B-229ENST00000543393 C21orf140B9A014 251 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 MT-ND3P03897 115 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 ZNF30P17039 623 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 LEPRP48357 1165 aaKnown RBP18.04■□□□□ 0.48
RAP1B-229ENST00000543393 CCL11P51671 97 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 UBE2IP63279 158 aaKnown RBP18.04■□□□□ 0.48
RAP1B-229ENST00000543393 SYCP1Q15431 976 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 TCP11X2Q5H9J9 407 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 RALGPS1Q5JS13 557 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 NDUFAF2Q8N183 169 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 AVL9Q8NBF6 648 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 PLEKHG4BQ96PX9 1271 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 BRD8Q9H0E9 1235 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 TAB2Q9NYJ8 693 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 CWC15Q9P013 229 aaKnown RBP18.04■□□□□ 0.48
RAP1B-229ENST00000543393 CNOT6Q9ULM6 557 aaKnown RBP18.04■□□□□ 0.48
RAP1B-229ENST00000543393 SLC30A1Q9Y6M5 507 aa18.04■□□□□ 0.48
RAP1B-229ENST00000543393 ANKRD17O75179 2603 aaKnown RBP18.03■□□□□ 0.48
RAP1B-229ENST00000543393 WIPF3A6NGB9 483 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 RASSF9O75901 435 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 UBXN7O94888 489 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 TIAF1O95411 115 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 AMD1P17707 334 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 PSMA2P25787 234 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 TNFRSF8P28908 595 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 STC1P52823 247 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 DPYSQ14117 519 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 UGT8Q16880 541 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.03■□□□□ 0.485e-6■■■□□ 15.7
RAP1B-229ENST00000543393 CYP4V2Q6ZWL3 525 aaPredicted RBP18.03■□□□□ 0.48
RAP1B-229ENST00000543393 PPP1R3BQ86XI6 285 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 PHYKPLQ8IUZ5 450 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 BBS5Q8N3I7 341 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 THAP4Q8WY91 577 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 RMI1Q9H9A7 625 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 UCK1Q9HA47 277 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 ACSS2Q9NR19 701 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 LUZP4Q9P127 313 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 ERRFI1Q9UJM3 462 aaPredicted RBP18.03■□□□□ 0.48
RAP1B-229ENST00000543393 SRPK3Q9UPE1 567 aa18.03■□□□□ 0.48
RAP1B-229ENST00000543393 A0A0J9YYE9 177 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 KIF1CO43896 1103 aaKnown RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 FZD6O60353 706 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 MAFKO60675 156 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 LDLRP01130 860 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 TRBC1P01850 177 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 MMP13P45452 471 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 HCAR3P49019 387 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 RPS18P62269 152 aaKnown RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 DPCR1Q3MIW9 517 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 PAPD7Q5XG87 772 aaKnown RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 JMJD6Q6NYC1 403 aaPredicted RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 TMEM26Q6ZUK4 368 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 MCOLN2Q8IZK6 566 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 Q8NA96 180 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 TCTN2Q96GX1 697 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 SLC29A3Q9BZD2 475 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 ING2Q9H160 280 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 AKIRIN1Q9H9L7 192 aaPredicted RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 SCHIP1Q9P0W5 487 aaPredicted RBP18.02■□□□□ 0.48
RAP1B-229ENST00000543393 MAP10Q9P2G4 905 aa18.02■□□□□ 0.48
RAP1B-229ENST00000543393 ARGFXA6NJG6 315 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 FADS2P1A8MWK0 482 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 GRID2O43424 1007 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 VIPP01282 170 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 XRCC1P18887 633 aaPredicted RBP18.01■□□□□ 0.47
RAP1B-229ENST00000543393 EEF1GP26641 437 aaKnown RBP18.01■□□□□ 0.47
RAP1B-229ENST00000543393 MARC1Q5VT66 337 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 CACHD1Q5VU97 1274 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 FAM199XQ6PEV8 388 aaPredicted RBP18.01■□□□□ 0.47
RAP1B-229ENST00000543393 PRSS42Q7Z5A4 293 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 WDR24Q96S15 920 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 AGPAT1Q99943 283 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 GPR87Q9BY21 358 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 OSGEPL1Q9H4B0 414 aa18.01■□□□□ 0.47
RAP1B-229ENST00000543393 PRPSAP2O60256 369 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 NUAK1O60285 661 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 LRCH4O75427 683 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 CLDN7O95471 211 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 POU3F2P20265 443 aaPredicted RBP18■□□□□ 0.47
RAP1B-229ENST00000543393 PTPN4P29074 926 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 MIPP30301 263 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 ZNF135P52742 658 aaPredicted RBP18■□□□□ 0.47
RAP1B-229ENST00000543393 EPHB1P54762 984 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 MAMLD1Q13495 774 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 CHRNA6Q15825 494 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 ACAD10Q6JQN1 1059 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 FAM92BQ6ZTR7 304 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 SYVN1Q86TM6 617 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 TRIM48Q8IWZ4 208 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 SRRM1Q8IYB3 904 aaKnown RBP18■□□□□ 0.47
RAP1B-229ENST00000543393 NSMCE1Q8WV22 266 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 KLHL6Q8WZ60 621 aa18■□□□□ 0.47
RAP1B-229ENST00000543393 RSC1A1Q92681 617 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms