RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 PCDHGA8Q9Y5G5 932 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 DNAJC25-GNG10A0A024R161 153 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 C16orf96A6NNT2 1141 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 OXSR1O95747 527 aaPredicted RBP23.58■■□□□ 1.37
SHD-201ENST00000543264 S1PR4O95977 384 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 CD1DP15813 335 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 ZNF135P52742 658 aaPredicted RBP23.58■■□□□ 1.37
SHD-201ENST00000543264 EEFSECP57772 596 aaKnown RBP23.58■■□□□ 1.37
SHD-201ENST00000543264 NFKB2Q00653 900 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 SCIMPQ6UWF3 145 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 OR13J1Q8NGT2 312 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 ASB2Q96Q27 587 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 CACNG4Q9UBN1 327 aa23.58■■□□□ 1.37
SHD-201ENST00000543264 RBMX2Q9Y388 322 aaKnown RBP23.58■■□□□ 1.37
SHD-201ENST00000543264 UPK1AO00322 258 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 C1RP00736 705 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 CYBBP04839 570 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 ARSDP51689 593 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 TRIM32Q13049 653 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 OR4D1Q15615 310 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 TIGD2Q4W5G0 525 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 DLK2Q6UY11 383 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 SLC16A12Q6ZSM3 486 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 RIMKLAQ8IXN7 391 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 TOP6BLQ8N6T0 577 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 SEMA4BQ9NPR2 832 aaPredicted RBP23.57■■□□□ 1.36
SHD-201ENST00000543264 TIMM13Q9Y5L4 95 aaPredicted RBP23.57■■□□□ 1.36
SHD-201ENST00000543264 MYBPHLA2RUH7 354 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 SLC25A27O95847 323 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 HTR1AP08908 422 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 ZNF24P17028 368 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 DNASE1L3Q13609 305 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 RCAN2Q14206 197 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 APOBEC3FQ8IUX4 373 aaKnown RBP23.57■■□□□ 1.36
SHD-201ENST00000543264 PARP8Q8N3A8 854 aa23.57■■□□□ 1.36
SHD-201ENST00000543264 RGS17Q9UGC6 210 aaPredicted RBP23.57■■□□□ 1.36
SHD-201ENST00000543264 DEAF1O75398 565 aaPredicted RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 JRKO75564 520 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 WISP3O95389 354 aaPredicted RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 SERPINH1P50454 418 aaKnown RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 ITKQ08881 620 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 PROSER1Q86XN7 944 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 SMURF2Q9HAU4 748 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 PCDH12Q9NPG4 1184 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 MTRRQ9UBK8 725 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 EVLQ9UI08 416 aaPredicted RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 PDE10AQ9Y233 779 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 RALGAPA2Q2PPJ7 1873 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 PTGES3LE9PB15 166 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 HTR1EP28566 365 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 IST1P53990 364 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 IFITM3Q01628 133 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 PGS1Q32NB8 556 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 C6orf141Q5SZD1 244 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 IQSEC1Q6DN90 963 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 SLCO6A1Q86UG4 719 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 ZFP90Q8TF47 636 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 KLHL25Q9H0H3 589 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 RMI1Q9H9A7 625 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 LEF1Q9UJU2 399 aaPredicted RBP23.56■■□□□ 1.36
SHD-201ENST00000543264 COL1A2P08123 1366 aa23.56■■□□□ 1.36
SHD-201ENST00000543264 EEDO75530 441 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 SLC22A3O75751 556 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 INMTO95050 263 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 CDH1P12830 882 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 MTHFD2P13995 350 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 GJA8P48165 433 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 HABP4Q5JVS0 413 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 TMEM199Q8N511 208 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 HDAC2Q92769 488 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 PCED1BQ96HM7 432 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 CCDC90BQ9GZT6 254 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 PIN4Q9Y237 131 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 PCDHB3Q9Y5E6 796 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 AXIN1O15169 862 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 NOBOXO60393 691 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 ZFP36L2P47974 494 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 BCL2A1Q16548 175 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 DPY19L1Q2PZI1 675 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 TFAP2DQ7Z6R9 452 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 WDR12Q9GZL7 423 aaKnown RBP23.55■■□□□ 1.36
SHD-201ENST00000543264 FAM118AQ9NWS6 357 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 KCTD3Q9Y597 815 aa23.55■■□□□ 1.36
SHD-201ENST00000543264 RBM47A0AV96 593 aaKnown RBP23.54■■□□□ 1.36
SHD-201ENST00000543264 MAN1A2O60476 641 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 AGXTP21549 392 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 SLC26A3P40879 764 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 MTHFRP42898 656 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 POLR2JP52435 117 aaKnown RBP23.54■■□□□ 1.36
SHD-201ENST00000543264 MAXP61244 160 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 CLCQ05315 142 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 BHLHA9Q7RTU4 235 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 TTC30BQ8N4P2 665 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 CHDHQ8NE62 594 aaPredicted RBP23.54■■□□□ 1.36
SHD-201ENST00000543264 ZNF641Q96N77 438 aaPredicted RBP23.54■■□□□ 1.36
SHD-201ENST00000543264 ENPP5Q9UJA9 477 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 NEU3Q9UQ49 428 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 SNX5Q9Y5X3 404 aa23.54■■□□□ 1.36
SHD-201ENST00000543264 WDR90Q96KV7 1748 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms