RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 KCNJ11Q14654 390 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 CHRNA6Q15825 494 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 PYCR3Q53H96 274 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 N4BP2L1Q5TBK1 243 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 GALNT13Q8IUC8 556 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 DDHD1Q8NEL9 900 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 OR13C4Q8NGS5 318 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 PTCD2Q8WV60 388 aaKnown RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 PEX13Q92968 403 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 GLMNQ92990 594 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ZCCHC2Q9C0B9 1178 aaKnown RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 DDX47Q9H0S4 455 aaKnown RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 NLE1Q9NVX2 485 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 FKBPLQ9UIM3 349 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 TMPRSS11EQ9UL52 423 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 DOLKQ9UPQ8 538 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 KCTD3Q9Y597 815 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 LY6G6EA0A0G2JKS1 128 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 AGAP14A8MT82 685 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 CHUKO15111 745 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 NUAK1O60285 661 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 SRP72O76094 671 aaKnown RBP18.2■□□□□ 0.5
COPS7A-216ENST00000543170 CDK4P11802 303 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 TPH1P17752 444 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ADCY8P40145 1251 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 GRIA1P42261 906 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 XIAPP98170 497 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 NFATC2Q13469 925 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 SEPT6Q14141 434 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 PTPRCAPQ14761 206 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 TRIP13Q15645 432 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-216ENST00000543170 LDLRAP1Q5SW96 308 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ARMC3Q5W041 872 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 SYT10Q6XYQ8 523 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ADGRG6Q86SQ4 1221 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ARL10Q8N8L6 244 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 DNAJC1Q96KC8 554 aaKnown RBP18.2■□□□□ 0.5
COPS7A-216ENST00000543170 APOLD1Q96LR9 279 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 PIH1D1Q9NWS0 290 aaKnown RBP18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ATXN10Q9UBB4 475 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 U3KQA8 63 aa18.2■□□□□ 0.5
COPS7A-216ENST00000543170 ARHGEF17Q96PE2 2063 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-216ENST00000543170 ITGALP20701 1170 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 ADRA1DP25100 572 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 RPIAP49247 311 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 VPS41P49754 854 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 DUSP3P51452 185 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-216ENST00000543170 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
COPS7A-216ENST00000543170 DAB2P98082 770 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 FOXK2Q01167 660 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 PTK6Q13882 451 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 CERCAMQ5T4B2 595 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 LRRC8BQ6P9F7 803 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 SYDE1Q6ZW31 735 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-216ENST00000543170 ZNF534Q76KX8 674 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 NLRP9Q7RTR0 991 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 TAF8Q7Z7C8 310 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 NRROSQ86YC3 692 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 ZNF398Q8TD17 642 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 CPT1BQ92523 772 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 ULK4Q96C45 1275 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-216ENST00000543170 IL22Q9GZX6 179 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 OR2AG1Q9H205 316 aa18.19■□□□□ 0.5
COPS7A-216ENST00000543170 BPTFQ12830 3046 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 RFPL3O75679 317 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 GP1BAP07359 652 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 ZNF8P17098 575 aaPredicted RBP18.18■□□□□ 0.5
COPS7A-216ENST00000543170 CTBSQ01459 385 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 ACVR1Q04771 509 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 DNAJC3Q13217 504 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 PPP1R7Q15435 360 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 NR0B2Q15466 257 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 SKIDA1Q1XH10 827 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 GPR33Q49SQ1 333 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 OGFOD3Q6PK18 319 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 MARK2Q7KZI7 788 aaKnown RBP18.18■□□□□ 0.5
COPS7A-216ENST00000543170 SNX20Q7Z614 316 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 PPHLN1Q8NEY8 458 aaKnown RBP18.18■□□□□ 0.5
COPS7A-216ENST00000543170 CCL4L1Q8NHW4 92 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 ADAMTS14Q8WXS8 1223 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 ASB8Q9H765 288 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.18■□□□□ 0.5
COPS7A-216ENST00000543170 GPR34Q9UPC5 381 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 TCAF1Q9Y4C2 921 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 GPSM3Q9Y4H4 160 aa18.18■□□□□ 0.5
COPS7A-216ENST00000543170 TRBV5-4A0A0C4DH59 114 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 TCRBV7S3A2A0A539 114 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 EME2A4GXA9 379 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-216ENST00000543170 GPR39O43194 453 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 GRID2O43424 1007 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 UGT1A9O60656 530 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 CDK14O94921 469 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 TUBB4AP04350 444 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 MLNP12872 115 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 UGT1A6P19224 532 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 UGT1A1P22309 533 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 UGT1A4P22310 534 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 PMLP29590 882 aa18.17■□□□□ 0.5
COPS7A-216ENST00000543170 MC4RP32245 332 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms