RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TP53BP1Q12888 1972 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 GOLGA6L9A6NEM1 432 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 B4E171 279 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 KCNK5O95279 499 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 FTCDO95954 541 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TUBBP07437 444 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 INHBAP08476 426 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CDH1P12830 882 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 RARGP13631 454 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 PAX1P15863 534 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 MAOAP21397 527 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 HOXC13P31276 330 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 MAN1A1P33908 653 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ARL3P36405 182 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TSPAN7P41732 249 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TMPOP42166 694 aaKnown RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 HOXA1P49639 335 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 GALCP54803 685 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 BRWD1-AS2P59051 145 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 SEC61BP60468 96 aaKnown RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ISL1P61371 349 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TUBB4BP68371 445 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 FOXM1Q08050 763 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 SREBF2Q12772 1141 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 GRIK2Q13002 908 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 OLIG2Q13516 323 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CCDC96Q2M329 555 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 USP41Q3LFD5 358 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ZSCAN23Q3MJ62 389 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 KCNT1Q5JUK3 1230 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 C6orf141Q5SZD1 244 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TRNP1Q6NT89 227 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 FAM180BQ6P0A1 224 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ARHGAP11AQ6P4F7 1023 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 KCTD18Q6PI47 426 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CYP20A1Q6UW02 462 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 PQLC2Q6ZP29 291 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TMTC3Q6ZXV5 915 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 SLC9B2Q86UD5 537 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 KMT5CQ86Y97 462 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ODF3L1Q8IXM7 274 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CIARTQ8N365 385 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 TMEM116Q8NCL8 245 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 DUSP19Q8WTR2 217 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 IGSF8Q969P0 613 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 FAM149B1Q96BN6 582 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CDCA5Q96FF9 252 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 HARBI1Q96MB7 349 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 ASCL2Q99929 193 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 PCGF1Q9BSM1 259 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 SCPEP1Q9HB40 452 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 RANGRFQ9HD47 186 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 KRT84Q9NSB2 600 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 RRP7BPQ9NSQ0 103 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 CORO1CQ9ULV4 474 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-213ENST00000542727 LOXL2Q9Y4K0 774 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 MAU2Q9Y6X3 613 aa2.29□□□□□ -2.04
KNTC1-213ENST00000542727 PMS2P5A8MQ11 134 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 TAF4O00268 1085 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 SH3BP5O60239 455 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 PCDH7O60245 1069 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 PAGE4O60829 102 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 SLC25A12O75746 678 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 EIF2S1P05198 315 aaKnown RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 CLEC3BP05452 202 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 HOXB5P09067 269 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 DDX5P17844 614 aaKnown RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 RRM1P23921 792 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 GNL1P36915 607 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 PPARGP37231 505 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 PIK3CAP42336 1068 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 TERF1P54274 439 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 HNRNPH2P55795 449 aaKnown RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 CSNK2A1P68400 391 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 SETQ01105 290 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 RELQ04864 619 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 NAB2Q15742 525 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 KRT24Q2M2I5 525 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 ZNF876PQ49A33 203 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 CXorf66Q5JRM2 361 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 PXKQ7Z7A4 578 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 DSG4Q86SJ6 1040 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 BEST3Q8N1M1 668 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 TEX19Q8NA77 164 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 ZNF248Q8NDW4 579 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 CSNK2A3Q8NEV1 391 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 OR2AK2Q8NG84 335 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 OR8K5Q8NH50 307 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 SLC20A1Q8WUM9 679 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 APBB2Q92870 758 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 ARHGEF2Q92974 986 aaKnown RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 ANKRD9Q96BM1 317 aaPredicted RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 RHBDF1Q96CC6 855 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 RRNAD1Q96FB5 475 aaKnown RBP2.28□□□□□ -2.04
KNTC1-213ENST00000542727 GRAMD2BQ96HH9 432 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 C7orf26Q96N11 449 aa2.28□□□□□ -2.04
KNTC1-213ENST00000542727 SMC6Q96SB8 1091 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms