RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 DNAJB13P59910 316 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 TUBA4AP68366 448 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 IL10RBQ08334 325 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PABPC1LQ4VXU2 614 aaKnown RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 INO80DQ53TQ3 878 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 DEPDC1Q5TB30 811 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 TRNP1Q6NT89 227 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ERMP1Q7Z2K6 904 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 AMER2Q8N7J2 671 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ZFP28Q8NHY6 868 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SPPL2BQ8TCT7 592 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 C16orf70Q9BSU1 422 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 MFSD1Q9H3U5 465 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 IPPKQ9H8X2 491 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PRDM5Q9NQX1 630 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SELENONQ9NZV5 590 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 MOSPD1Q9UJG1 213 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 GNPTGQ9UJJ9 305 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PCDHGC4Q9Y5F7 938 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 MYOCOSA0A1B0GUC4 107 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PNMA8CA0A1B0GUJ8 204 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 ELOVL7A1L3X0 281 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 G3V2L1 256 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 RFXANKO14593 260 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 HTRA2O43464 458 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SH3BGRLO75368 114 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 TULP3O75386 442 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 NADKO95544 446 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SERPIND1P05546 499 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 NR4A1P22736 598 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PPP1R3AQ16821 1122 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PIGGQ5H8A4 983 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 OR13C4Q8NGS5 318 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 S100ZQ8WXG8 99 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 OTULINQ96BN8 352 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 OTUB1Q96FW1 271 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 TSGA13Q96PP4 275 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 C2orf49Q9BVC5 232 aaPredicted RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 EMILIN2Q9BXX0 1053 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 LRRC3Q9BY71 257 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 FANCEQ9HB96 536 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 CRTAC1Q9NQ79 661 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 PTBP2Q9UKA9 531 aaKnown RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 EMCNQ9ULC0 261 aa8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 SAMHD1Q9Y3Z3 626 aaKnown RBP8.15□□□□□ -1.1
PRKAB1-207ENST00000542698 LAMB1P07942 1786 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 CTPS1P17812 591 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ALOX12P18054 663 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ACADVLP49748 655 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 CDK9P50750 372 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ST8SIA6P61647 398 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 MS4A2Q01362 244 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 SULT2A1Q06520 285 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF846Q147U1 533 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ZCCHC8Q6NZY4 707 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 CHSY3Q70JA7 882 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ADCK2Q7Z695 626 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 OR8H2Q8N162 312 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 OR10A6Q8NH74 314 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ZHX1-C8orf76Q96EF9 292 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC47A1Q96FL8 570 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 CDKN2AIPNLQ96HQ2 116 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 PHF12Q96QT6 1004 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 PANX1Q96RD7 426 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 RBM4BQ9BQ04 359 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 RBM4Q9BWF3 364 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 NUSAP1Q9BXS6 441 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 RERGLQ9H628 205 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 GALPQ9UBC7 116 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 KCNH4Q9UQ05 1017 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 ARL5AQ9Y689 179 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 TLL2Q9Y6L7 1015 aa8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 DDX60LQ5H9U9 1706 aaKnown RBP8.15□□□□□ -1.11
PRKAB1-207ENST00000542698 LOC100506127A0A0U1RQW1 187 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 SYNDIG1LA6NDD5 238 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 ARPC2O15144 300 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 FTH1P02794 183 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 COX7A2P14406 83 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 KRT20P35900 424 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 CHI3L1P36222 383 aaPredicted RBP8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 SLC26A3P40879 764 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 GSK3BP49841 420 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 ERVK-8P63133 956 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 DUSP4Q13115 394 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 SIM2Q14190 667 aaPredicted RBP8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 ZNF284Q2VY69 593 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 ZC3H12BQ5HYM0 836 aaKnown RBP8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 PAGE2BQ5JRK9 111 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 EGFLAMQ63HQ2 1017 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 MSANTD2Q6P1R3 559 aa8.14□□□□□ -1.11
PRKAB1-207ENST00000542698 GALNT18Q6P9A2 607 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms