RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 DDX43Q9NXZ2 648 aaKnown RBP4.6□□□□□ -1.67
MDM2-228ENST00000542502 KLHL13Q9P2N7 655 aa4.6□□□□□ -1.67
MDM2-228ENST00000542502 UXTQ9UBK9 157 aaPredicted RBP4.6□□□□□ -1.67
MDM2-228ENST00000542502 SIX4Q9UIU6 781 aa4.6□□□□□ -1.67
MDM2-228ENST00000542502 CEP83Q9Y592 693 aa4.6□□□□□ -1.67
MDM2-228ENST00000542502 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.6□□□□□ -1.672e-12■□□□□ 9.4
MDM2-228ENST00000542502 BZW2Q9Y6E2 419 aaKnown RBP4.6□□□□□ -1.67
MDM2-228ENST00000542502 CLUHO75153 1309 aa4.6□□□□□ -1.67
MDM2-228ENST00000542502 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 RASA4BC9J798 803 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 TEX28O15482 410 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 RASA4O43374 803 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 RTN3O95197 1032 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 VNN1O95497 513 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CNPP09543 421 aaKnown RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 CSH1P0DML2 217 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CSH2P0DML3 217 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 VDRP11473 427 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CYP2A6P11509 494 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 ANXA13P27216 316 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 IL1R2P27930 398 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CCKARP32238 428 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 MYH10P35580 1976 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PBX3P40426 434 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 MTHFRP42898 656 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 BRCC3P46736 316 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 NRIP1P48552 1158 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PRIM2P49643 509 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CLCN4P51793 760 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 ARFIP2P53365 341 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 COPB1P53618 953 aaKnown RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 TPTEP56180 551 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SOX8P57073 446 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 UBASH3AP57075 661 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 LINC00205P59089 165 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PTPRJQ12913 1337 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 E2F2Q14209 437 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SYCP1Q15431 976 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CNGA2Q16280 664 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CBWD6Q4V339 395 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CBWD3Q5JTY5 395 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CBWD5Q5RIA9 395 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PPM1LQ5SGD2 360 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 C10orf62Q5T681 223 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 PLPP4Q5VZY2 271 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 WSCD1Q658N2 575 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 RGS7BPQ6MZT1 257 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 FAM171BQ6P995 826 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 TRIM65Q6PJ69 517 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SARM1Q6SZW1 724 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 C11orf57Q6ZUT1 292 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 CACNA2D4Q7Z3S7 1137 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 IRF2BP2Q7Z5L9 587 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 VPS36Q86VN1 386 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SPATA2LQ8IUW3 424 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 DHX40Q8IX18 779 aaKnown RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 NRACQ8N912 160 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 TERB1Q8NA31 727 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 VN1R2Q8NFZ6 395 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 OR6B3Q8NGW1 331 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 TAS1R2Q8TE23 839 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SYN2Q92777 582 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 COQ8BQ96D53 544 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SPATA17Q96L03 361 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SGCZQ96LD1 299 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SPAG5Q96R06 1193 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 SNX18Q96RF0 628 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 ARPC5LQ9BPX5 153 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 FAM118BQ9BPY3 351 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CLSTN3Q9BQT9 956 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PAAF1Q9BRP4 392 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 STK33Q9BYT3 514 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 TRIM54Q9BYV2 358 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 ZNF518BQ9C0D4 1074 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 GPR88Q9GZN0 384 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 INTS2Q9H0H0 1204 aaKnown RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 ZCWPW1Q9H0M4 648 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 FBXO44Q9H4M3 255 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CERS4Q9HA82 394 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 UBE2TQ9NPD8 197 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 CISHQ9NSE2 258 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 PIH1D1Q9NWS0 290 aaKnown RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.59□□□□□ -1.67
MDM2-228ENST00000542502 CORO2BQ9UQ03 480 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CNTN6Q9UQ52 1028 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 CDY1Q9Y6F8 540 aa4.59□□□□□ -1.67
MDM2-228ENST00000542502 VWA8A3KMH1 1905 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 COL4A4P53420 1690 aaPredicted RBP4.58□□□□□ -1.68
MDM2-228ENST00000542502 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.58□□□□□ -1.68
MDM2-228ENST00000542502 RHPN2P1A8MT19 583 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 FCHO1O14526 889 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 KPNA5O15131 536 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 DLDP09622 509 aaKnown RBP4.58□□□□□ -1.68
MDM2-228ENST00000542502 FAM200BP0CF97 657 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 SETSIPP0DME0 302 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 BRAFP15056 766 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 UCHL3P15374 230 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 PTPN2P17706 415 aa4.58□□□□□ -1.68
MDM2-228ENST00000542502 RPL17P18621 184 aaKnown RBP4.58□□□□□ -1.68
MDM2-228ENST00000542502 DNAJB1P25685 340 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms