RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SEMA3AQ14563 771 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 FXNQ16595 210 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 NRF1Q16656 503 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PARP15Q460N3 678 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 KCTD21Q4G0X4 260 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SETMARQ53H47 684 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ACBD5Q5T8D3 534 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM219BQ5XKK7 198 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 OGFOD2Q6N063 350 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CYP2R1Q6VVX0 501 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 AMIGO2Q86SJ2 522 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 LDB1Q86U70 411 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC15A3Q8IY34 581 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 MIER2Q8N344 545 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PTGR2Q8N8N7 351 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SNX31Q8N9S9 440 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PAPD5Q8NDF8 572 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 OR6P1Q8NGX9 317 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ADAMTS16Q8TE57 1224 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TRPC4APQ8TEL6 797 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 HASPINQ8TF76 798 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ZDHHC1Q8WTX9 485 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TWIST2Q8WVJ9 160 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CANT1Q8WVQ1 401 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 IGSF8Q969P0 613 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 KIAA1191Q96A73 305 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CRELD1Q96HD1 420 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC45A3Q96JT2 553 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 BTN2A3PQ96KV6 586 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TBATAQ96M53 351 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIB3Q96RU7 358 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TCF12Q99081 682 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 AARSD1Q9BTE6 412 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SEMA6AQ9H2E6 1030 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 MUC13Q9H3R2 512 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 FBXO44Q9H4M3 255 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 NOL11Q9H8H0 719 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SP110Q9HB58 689 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PDFQ9HBH1 243 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TIMMDC1Q9NPL8 285 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 C8orf4Q9NR00 106 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 AGPAT4Q9NRZ5 378 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 INTS10Q9NVR2 710 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TMEM45AQ9NWC5 275 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CMTM6Q9NX76 183 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TUBA8Q9NY65 449 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ACTR3BQ9P1U1 418 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 GMPR2Q9P2T1 348 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 UXTQ9UBK9 157 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PHF24Q9UPV7 400 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 MED16Q9Y2X0 877 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PCDHA9Q9Y5H5 950 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 HRH3Q9Y5N1 445 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SNX13Q9Y5W8 968 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 GPR45Q9Y5Y3 372 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 MRPL42Q9Y6G3 142 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 AK5Q9Y6K8 562 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ANKRD36A6QL64 1941 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6AP2A0A1C7CYW4 349 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 LCHNA4D1U4 455 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 LRRC14BA6NHZ5 514 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF839A8K0R7 811 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 H3BSA7 217 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 UBXN8O00124 270 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PPP6CO00743 305 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SOCS2O14508 198 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PIP5K1BO14986 540 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 MUSKO15146 869 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 B4GALT3O60512 393 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PRAMEF11O60813 436 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 KERAO60938 352 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TIPRLO75663 272 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6AP2O75787 350 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SIX3O95343 332 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 GLP2RO95838 553 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 RPS17P08708 135 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 OR4Q2P0C623 313 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CDK4P11802 303 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CKMT2P17540 419 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 LBPP18428 481 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TSPAN8P19075 237 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CD9P21926 228 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 MYF6P23409 242 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PCSK6P29122 969 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 MAGEA11P43364 429 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 MAPKAPK2P49137 400 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 STC1P52823 247 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CDH13P55290 713 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 FOXA1P55317 472 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 NAA20P61599 178 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 DSC1Q08554 894 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ITKQ08881 620 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 BIRC2Q13490 618 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 GRB7Q14451 532 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 LPIN1Q14693 890 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6AP1Q15904 470 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 NFE2Q16621 373 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 C5orf22Q49AR2 442 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms