RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TYMPP19971 482 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CDH3P22223 829 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 FGFR3P22607 806 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 MAP4P27816 1152 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 NOS2P35228 1153 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CAPGP40121 348 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 MRPL19P49406 292 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 BCAP31P51572 246 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 NDST1P52848 882 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RELAQ04206 551 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 LRP8Q14114 963 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 TAF5Q15542 800 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 C15orf59Q2T9L4 293 aaPredicted RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 PKDCCQ504Y2 493 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 BROXQ5VW32 411 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 IL23RQ5VWK5 629 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 TANGO2Q6ICL3 276 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 LCN8Q6JVE9 175 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 LRRC8EQ6NSJ5 796 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 ZC3H14Q6PJT7 736 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 MTSS1LQ765P7 747 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 PELI3Q8N2H9 469 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 TMEM86AQ8N2M4 240 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 MPP5Q8N3R9 675 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CCNYQ8ND76 341 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 PPHLN1Q8NEY8 458 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 SHDQ96IW2 340 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 SENP8Q96LD8 212 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RANBP9Q96S59 729 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CORO1BQ9BR76 489 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 ADI1Q9BV57 179 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 KIFC1Q9BW19 673 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 TRIM54Q9BYV2 358 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 GBA3Q9H227 469 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 LTB4R2Q9NPC1 389 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CD300AQ9UGN4 299 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 FZD10Q9ULW2 581 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RUVBL2Q9Y230 463 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 ZNF711Q9Y462 761 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 PCDHGA7Q9Y5G6 932 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 COPG1Q9Y678 874 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 EP300Q09472 2414 aaPredicted RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 DHRS12A0PJE2 317 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 EEF2KO00418 725 aaKnown RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 PRRG1O14668 218 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 GABRDO14764 452 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 CLOCKO15516 846 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 MRPS14O60783 128 aaKnown RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 TULP3O75386 442 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 DEAF1O75398 565 aaPredicted RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 HPRP00739 348 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 PRKCGP05129 697 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 RHOP08100 348 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 ERVK-10P10266 1014 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 ODC1P11926 461 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 CSRP3P50461 194 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 HLCSP50747 726 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 SCNN1BP51168 640 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 NAGLUP54802 743 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 GBE1Q04446 702 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 NSUN2Q08J23 767 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHFR-219ENST00000541341 RAB33AQ14088 237 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 MRPL58Q14197 206 aaKnown RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 SOWAHAQ2M3V2 549 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 SLC36A3Q495N2 470 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 TBCELQ5QJ74 424 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 VWA5B1Q5TIE3 1220 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 TTC23Q5W5X9 447 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 CRYBG2Q8N1P7 616 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 LZTR1Q8N653 840 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 FAM47BQ8NA70 645 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 SUMF1Q8NBK3 374 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 LPGAT1Q92604 370 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 C12orf43Q96C57 262 aaKnown RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 SDCCAG3Q96C92 435 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 HDAC11Q96DB2 347 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 DNAJC1Q96KC8 554 aaKnown RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 ZNF347Q96SE7 839 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 CGREF1Q99674 301 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 MAGEB5Q9BZ81 275 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 EPS8L2Q9H6S3 715 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 SMPD3Q9NY59 655 aaPredicted RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 MTRRQ9UBK8 725 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 DSEQ9UL01 958 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 PSME2Q9UL46 239 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 RNF11Q9Y3C5 154 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 SNX9Q9Y5X1 595 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 ZFP37Q9Y6Q3 630 aaPredicted RBP10.35□□□□□ -0.75
CHFR-219ENST00000541341 MYO16Q9Y6X6 1858 aa10.35□□□□□ -0.75
CHFR-219ENST00000541341 ZCWPW2A0A1B0GU75 182 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 FUOMA2VDF0 154 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms