RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 UGT1A3P35503 534 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A5P35504 534 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 FDFT1P37268 417 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ACTR1BP42025 376 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 EMP3P54852 163 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ACTR1AP61163 376 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 GNG11P61952 73 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 CTBSQ01459 385 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 MSLNQ13421 630 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 SEPT6Q14141 434 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 POU6F1Q14863 301 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 SMAD1Q15797 465 aaKnown RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 CHRNA6Q15825 494 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 HES3Q5TGS1 186 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 CHST15Q7LFX5 561 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 EFL1Q7Z2Z2 1120 aaKnown RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ADGRG6Q86SQ4 1221 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 NRROSQ86YC3 692 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 SFTPA2Q8IWL1 248 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 GALNT15Q8N3T1 639 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 RASGEF1CQ8N431 466 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 DNAAF3Q8N9W5 541 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 OR52K1Q8NGK4 314 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 GDAP1Q8TB36 358 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 NAP1L3Q99457 506 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ABCG4Q9H172 646 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 OR2AG1Q9H205 316 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A7Q9HAW7 530 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A10Q9HAW8 530 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A8Q9HAW9 530 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 TRIM39Q9HCM9 518 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 SPATS2LQ9NUQ6 558 aaKnown RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 TAAR2Q9P1P5 351 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 PADI4Q9UM07 663 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 SNX12Q9UMY4 172 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 DRG1Q9Y295 367 aaKnown RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 PLEKHM1Q9Y4G2 1056 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 NEUROG3Q9Y4Z2 214 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 PCYT1BQ9Y5K3 369 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ST14Q9Y5Y6 855 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 NCOR2Q9Y618 2525 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ERI2A8K979 691 aaKnown RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 CCL22O00626 93 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF185O15231 689 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GRID2O43424 1007 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 VEGFDO43915 354 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 NUAK1O60285 661 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 OPA1O60313 960 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 CDK14O94921 469 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 PRAMEF1O95521 474 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GAS8O95995 478 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GP1BAP07359 652 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 ACP5P13686 325 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 JUPP14923 745 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 BASP1P80723 227 aaKnown RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 PDE1BQ01064 536 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 E2F1Q01094 437 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 SEMA5AQ13591 1074 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 LRP8Q14114 963 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TRIP13Q15645 432 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 KHDC1Q4VXA5 237 aaKnown RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 PERM1Q5SV97 790 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 CRTC3Q6UUV7 619 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 PPP1R21Q6ZMI0 780 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TMPRSS7Q7RTY8 843 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 LINC00523Q86TU6 105 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TMPRSS12Q86WS5 348 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GPR156Q8NFN8 814 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 OR13C4Q8NGS5 318 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 MAPK15Q8TD08 544 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 ZDHHC1Q8WTX9 485 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 NAT6Q93015 286 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 MAGOHBQ96A72 148 aaKnown RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TTC25Q96NG3 672 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 VPS35Q96QK1 796 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 RMI1Q9H9A7 625 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TMPRSS11EQ9UL52 423 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 KCNK6Q9Y257 313 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 MSRB2Q9Y3D2 182 aa9.13□□□□□ -0.95
SNHG1-215ENST00000540904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNHG1-215ENST00000540904 GOLGA6L10A0A0M3HER8 536 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CCDC78A2IDD5 438 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 LDB2O43679 373 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 NOBOXO60393 691 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 SNX2O60749 519 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 SRP72O76094 671 aaKnown RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 SUN1O94901 812 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ECEL1O95672 775 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 AKT1P31749 480 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 CA5AP35218 305 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 HADHAP40939 763 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 GRIA1P42261 906 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 VPS41P49754 854 aa9.12□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-215ENST00000540904 TERF1P54274 439 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms