RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 U3KQV3 271 aa12.78□□□□□ -0.36
SFSWAP-209ENST00000540469 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
SFSWAP-209ENST00000540469 TCF3P15923 654 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 TKTL1P51854 596 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 MTPNP58546 118 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 KCNAB2Q13303 367 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 PAGE3Q5JUK9 113 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 PIM3Q86V86 326 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 SYTL1Q8IYJ3 562 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 ABI1Q8IZP0 508 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 C17orf80Q9BSJ5 609 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 MCMBPQ9BTE3 642 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 COMMD8Q9NX08 183 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 SNTG2Q9NY99 539 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 EVLQ9UI08 416 aaPredicted RBP12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 MOSPD1Q9UJG1 213 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 VWA7Q9Y334 891 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.36
SFSWAP-209ENST00000540469 A0A1W2PP18 115 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 ILVBLA1L0T0 632 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 NCS1P62166 190 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 UNC50Q53HI1 259 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 NLGN2Q8NFZ4 835 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 MCOLN3Q8TDD5 553 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 EDEM1Q92611 657 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 NSUN5Q96P11 429 aaKnown RBP12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 FAM118AQ9NWS6 357 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 OR12D3Q9UGF7 316 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 GTF2IRD1Q9UHL9 959 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
SFSWAP-209ENST00000540469 CCNKO75909 580 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CDK14O94921 469 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CDH1P12830 882 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 PTPRAP18433 802 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CLCN5P51795 746 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 VAC14Q08AM6 782 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 TOP3AQ13472 1001 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 BLOC1S3Q6QNY0 202 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 LGI2Q8N0V4 545 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 WDCPQ9H6R7 721 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MAGEE1Q9HCI5 957 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ITM2CQ9NQX7 267 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 POLG2Q9UHN1 485 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NCF1BA6NI72 391 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NCF1CA8MVU1 366 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ALPLP05186 524 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NCF1P14598 390 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ALOX12P18054 663 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ST13P50502 369 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 FOXM1Q08050 763 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ATP6AP1LQ52LC2 224 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 COLEC12Q5KU26 742 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NOL9Q5SY16 702 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 APPL2Q8NEU8 664 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MUL1Q969V5 352 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ZHX1-C8orf76Q96EF9 292 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ZNF486Q96H40 463 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NEK6Q9HC98 313 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MOV10Q9HCE1 1003 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 OAS3Q9Y6K5 1087 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 TYW5A2RUC4 315 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ANKRD34BA5PLL1 514 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 SLC1A7O00341 560 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 HBP1O60381 514 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 SLC22A3O75751 556 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ANGPTL1O95841 491 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 FADS2O95864 444 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 C1RP00736 705 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CHRNA1P02708 482 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 ANXA6P08133 673 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 RAP2AP10114 183 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 PRKACGP22612 351 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 MAP2K4P45985 399 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 GEMP55040 296 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 UFM1P61960 85 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 HERVK_113P63132 956 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 EPS8Q12929 822 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 OR13J1Q8NGT2 312 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 COPS5Q92905 334 aa12.76□□□□□ -0.37
SFSWAP-209ENST00000540469 NPY6RQ99463 290 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms