RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 SPATA19Q7Z5L4 167 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 THAP5Q7Z6K1 395 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 LDB1Q86U70 411 aaPredicted RBP11.16□□□□□ -0.62
CPT1A-206ENST00000540367 SPARTQ8N0X7 666 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
CPT1A-206ENST00000540367 FKBP10Q96AY3 582 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 SH3YL1Q96HL8 342 aaPredicted RBP11.16□□□□□ -0.62
CPT1A-206ENST00000540367 TMEM74Q96NL1 305 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 NSUN5Q96P11 429 aaKnown RBP11.16□□□□□ -0.62
CPT1A-206ENST00000540367 ALPK1Q96QP1 1244 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 YIPF2Q9BWQ6 316 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 SIK2Q9H0K1 926 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 MFSD1Q9H3U5 465 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 RGS18Q9NS28 235 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 AIG1Q9NVV5 245 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 TIMM13Q9Y5L4 95 aaPredicted RBP11.16□□□□□ -0.62
CPT1A-206ENST00000540367 V9GYQ6 96 aa11.16□□□□□ -0.62
CPT1A-206ENST00000540367 UPK1AO00322 258 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 FGF10O15520 208 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PRSS23O95084 383 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 CYBBP04839 570 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PRR35P0CG20 571 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 FDXRP22570 491 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 HOXC13P31276 330 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 SOX11P35716 441 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 GRIK2Q13002 908 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 AQP6Q13520 282 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 SPCS2Q15005 226 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PCBP1Q15365 356 aaKnown RBP eCLIP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 IL31Q6EBC2 164 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TAF2Q6P1X5 1199 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 CCDC80Q76M96 950 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 R3HCC1LQ7Z5L2 792 aaKnown RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TFAP2DQ7Z6R9 452 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PARP8Q8N3A8 854 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TTC30BQ8N4P2 665 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TMEM199Q8N511 208 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TMEM40Q8WWA1 233 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 HDAC2Q92769 488 aaKnown RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PCED1BQ96HM7 432 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TEX37Q96LM6 180 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 ZNF641Q96N77 438 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 ADNPQ9H2P0 1102 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 ATP13A1Q9HD20 1204 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 KIAA1522Q9P206 1035 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 LEF1Q9UJU2 399 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 USP22Q9UPT9 525 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 C16orf96A6NNT2 1141 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 MEIS3P2A8K0S8 358 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 KPNA6O60684 536 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TULP3O75386 442 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 DEAF1O75398 565 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 C1RP00736 705 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 HPRP00739 348 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 ENO2P09104 434 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 MTHFD2P13995 350 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 EEF1DP29692 281 aaKnown RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 GABARAPL2P60520 117 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 CD300CQ08708 224 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 OR4D1Q15615 310 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PFKFB4Q16877 469 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 LDLRAP1Q5SW96 308 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 SLC16A12Q6ZSM3 486 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 C8orf59Q8N0T1 100 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 RYBPQ8N488 228 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PDZD8Q8NEN9 1154 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 OR6P1Q8NGX9 317 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 TMBIM1Q969X1 311 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 CCDC138Q96M89 665 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 NSMCE2Q96MF7 247 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 HEPHQ9BQS7 1158 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 SLC25A51Q9H1U9 297 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 CATSPERBQ9H7T0 1116 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 HMG20AQ9NP66 347 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 MARCH4Q9P2E8 410 aaPredicted RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 MAGEL2Q9UJ55 1249 aa11.15□□□□□ -0.62
CPT1A-206ENST00000540367 PIN4Q9Y237 131 aaKnown RBP11.15□□□□□ -0.62
CPT1A-206ENST00000540367 MYBPHLA2RUH7 354 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 CCDC154A6NI56 674 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 AQP9O43315 295 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 BCAS1O75363 584 aaPredicted RBP11.14□□□□□ -0.63
CPT1A-206ENST00000540367 TCF3P15923 654 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 IL7RP16871 459 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 ZNF24P17028 368 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 HTR7P34969 479 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 AFF1P51825 1210 aaKnown RBP11.14□□□□□ -0.63
CPT1A-206ENST00000540367 OR4D2P58180 307 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 OCA2Q04671 838 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 EMX2Q04743 252 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 LCP2Q13094 533 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 BCL2A1Q16548 175 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 MANEALQ5VSG8 457 aa11.14□□□□□ -0.63
CPT1A-206ENST00000540367 CRTC3Q6UUV7 619 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms