RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CXCL11O14625 94 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 NPPAP01160 153 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 FTH1P02794 183 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 POU1F1P28069 291 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 RECQLP46063 649 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 UBE3AQ05086 875 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 NFE2Q16621 373 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TMBIM1Q969X1 311 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TSEN34Q9BSV6 310 aaKnown RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TRMT13Q9NUP7 481 aaKnown RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 A0A1W2PP18 115 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 DAOAP59103 153 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 RAB14P61106 215 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 MAXP61244 160 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ERVK-8P63133 956 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ZNF33AQ06730 810 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 SPDYE7PQ495Y7 208 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
DNMT1-203ENST00000540357 NPEPPSL1A6NEC2 478 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 PLK4O00444 970 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TOR1BO14657 336 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 SEPHS1P49903 392 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TAB1Q15750 504 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ZFP69Q49AA0 526 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ZNF621Q6ZSS3 439 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 CYP4Z1Q86W10 505 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 PARP8Q8N3A8 854 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 UBASH3BQ8TF42 649 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 TMEM245Q9H330 911 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
DNMT1-203ENST00000540357 RHOCP08134 193 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SOAT1P35610 550 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 PPP3CCP48454 512 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 RELAQ04206 551 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 IL18R1Q13478 541 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TP53BP2Q13625 1128 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TARBP2Q15633 366 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TYSND1Q2T9J0 566 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 AP5B1Q2VPB7 878 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 ARMC8Q8IUR7 673 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 IPCEF1Q8WWN9 437 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 LINGO1Q96FE5 620 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TMA7Q9Y2S6 64 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 MGAT4DA6NG13 374 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 GRID2O43424 1007 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 MVKQ03426 396 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 GALNT2Q10471 571 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 ZNF544Q6NX49 715 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 GLB1LQ6UWU2 654 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 C2CD4AQ8NCU7 369 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 NELL1Q92832 810 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 BIRC7Q96CA5 298 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 AGO3Q9H9G7 860 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 UBA2Q9UBT2 640 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CORO2BQ9UQ03 480 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 U3KQV3 271 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 LOC110117498-PIK3R3F6TDL0 507 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 AIREO43918 545 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CHI3L1P36222 383 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 GRIA2P42262 883 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 IDH2P48735 452 aaKnown RBP12.93□□□□□ -0.34
DNMT1-203ENST00000540357 OLIG2Q13516 323 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 PLEKHG6Q3KR16 790 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TMEM209Q96SK2 561 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SNX6Q9UNH7 406 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 ITGB4P16144 1822 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 C9IYK1 514 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 C22orf31O95567 290 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SLC35E2BP0CK96 405 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 LMO2P25791 158 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 HALP42357 657 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 NDUFV1P49821 464 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 ITGA1P56199 1179 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CEP78Q5JTW2 689 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 SAPCD2Q86UD0 394 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 MINDY1Q8N5J2 469 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 ZFP14Q9HCL3 533 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 NMRK2Q9NPI5 230 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 CDC14AQ9UNH5 594 aa12.93□□□□□ -0.34
DNMT1-203ENST00000540357 TCRBV5S1A1TA0A578 114 aa12.92□□□□□ -0.34
DNMT1-203ENST00000540357 CXCR6O00574 342 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms