RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 IFFO1Q0D2I5 559 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NAB1Q13506 487 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 IRF4Q15306 451 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TYSND1Q2T9J0 566 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 RAET1GQ6H3X3 334 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PNCKQ6P2M8 343 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SDCCAG8Q86SQ7 713 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SERPINA9Q86WD7 417 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DEFB119Q8N690 84 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SLC44A1Q8WWI5 657 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 C1QTNF7Q9BXJ2 289 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FBXO6Q9NRD1 293 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SMOXQ9NWM0 555 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CRLS1Q9UJA2 301 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NUMA1Q14980 2115 aa18.77■□□□□ 0.59
TNFRSF1A-213ENST00000540022 AHSGP02765 367 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 IGFALSP35858 605 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RPL6Q02878 288 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DBN1Q16643 649 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 AARS2Q5JTZ9 985 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLC36A4Q6YBV0 504 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 KIAA0408Q6ZU52 694 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 STRA8Q7Z7C7 330 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLC26A11Q86WA9 606 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 NXPE1Q8N323 547 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GABPB2Q8TAK5 448 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 EPS8L3Q8TE67 593 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 BTN2A2Q8WVV5 523 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LENG8Q96PV6 779 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DHRS4Q9BTZ2 278 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 NSMCE4AQ9NXX6 385 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 FETUBQ9UGM5 382 aa18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CNOT6Q9ULM6 557 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-213ENST00000540022 METTL12A8MUP2 240 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MAP2K7O14733 419 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 INPP4BO15327 924 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TCEA3O75764 348 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SASH3O75995 380 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HAUS5O94927 633 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HNRNPA2B1P22626 353 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ACRV1P26436 265 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PMLP29590 882 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MSH2P43246 934 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ABCG1P45844 678 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLCO1A2P46721 670 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LEPRP48357 1165 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 EIF3BP55884 814 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZNF844Q08AG5 666 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 INPP5AQ14642 412 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GPRC6AQ5T6X5 926 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LRIG3Q6UXM1 1119 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PACS1Q6VY07 963 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CERS6Q6ZMG9 384 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DENND6BQ8NEG7 585 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CADM4Q8NFZ8 388 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DCAKDQ8WVC6 231 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GLYATL1Q969I3 302 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ULK4Q96C45 1275 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CCDC97Q96F63 343 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 VPS35Q96QK1 796 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TCF12Q99081 682 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CPNE1Q99829 537 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MCMBPQ9BTE3 642 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PCED1AQ9H1Q7 454 aa18.75■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SMIM23A6NLE4 172 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MAP3K13O43283 966 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 OR1I1O60431 355 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GP5P40197 560 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TTPAP49638 278 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CNSTQ6PJW8 725 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GALNT7Q86SF2 657 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLC41A1Q8IVJ1 513 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 GAB3Q8WWW8 586 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ORAI3Q9BRQ5 295 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TMEM109Q9BVC6 243 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 BOCQ9BWV1 1114 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 INTS10Q9NVR2 710 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ZDHHC3Q9NYG2 299 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TXNDC16Q9P2K2 825 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 SLC24A2Q9UI40 661 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CA5BQ9Y2D0 317 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CEP250Q9BV73 2442 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 POM121BA6NF01 834 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 RASGRF2O14827 1237 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 MTX2O75431 263 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 NDUFS3O75489 264 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 PYGLP06737 847 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 IVLP07476 585 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 INHBAP08476 426 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TRIM23P36406 574 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CSE1LP55060 971 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 CLDN2P57739 230 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 KHDC1Q4VXA5 237 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 LYPLAL1Q5VWZ2 237 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 ADAMTSL4Q6UY14 1074 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 HEATR4Q86WZ0 1026 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 TMEM145Q8NBT3 493 aa18.74■□□□□ 0.59
TNFRSF1A-213ENST00000540022 DDHD1Q8NEL9 900 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms