RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ERFP50548 548 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 MRPS6P82932 125 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 IQCCQ4KMZ1 466 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 WDTC1Q8N5D0 677 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 XKR8Q9H6D3 395 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 KLK14Q9P0G3 267 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 HCN2Q9UL51 889 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 WBP11Q9Y2W2 641 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 RAD54BQ9Y620 910 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 A8MXQ7 604 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 H3BNC9 293 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 MSI1O43347 362 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 TRIM16O95361 564 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 AMHP03971 560 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 NDST1P52848 882 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 SLC5A3P53794 718 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 HES5Q5TA89 166 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 OGFOD2Q6N063 350 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 HTR3DQ70Z44 454 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 ANKFN1Q8N957 763 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 AVL9Q8NBF6 648 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 OR5H6Q8NGV6 325 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 SLC26A7Q8TE54 656 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 MCEEQ96PE7 176 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 C12orf57Q99622 126 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 LIN28AQ9H9Z2 209 aaKnown RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
DDX55-206ENST00000539934 CDY2AQ9Y6F7 541 aa12.54□□□□□ -0.4
DDX55-206ENST00000539934 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 M0QYV0 167 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PLK4O00444 970 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 GRM6O15303 877 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 KRT34O76011 436 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ANXA8P13928 327 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 F8A1P23610 371 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ZNF844Q08AG5 666 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 APOFQ13790 326 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ZBTB6Q15916 424 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PTPN20Q4JDL3 420 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 UBXN11Q5T124 520 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ANXA8L1Q5VT79 327 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ALKAL1Q6UXT8 129 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 BEND7Q8N7W2 519 aaPredicted RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 LRRC20Q8TCA0 184 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 SETD7Q8WTS6 366 aaKnown RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 SMG7Q92540 1137 aaKnown RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 STMN2Q93045 179 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 ZNF696Q9H7X3 374 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 FAM186AA6NE01 2351 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 AP3D1O14617 1153 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PPEF2O14830 753 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 TFEBP19484 476 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CTNNB1P35222 781 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 GJC1P36383 396 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CAPZA2P47755 286 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 ABRQ12979 859 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 TAF5Q15542 800 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 PRR23BQ6ZRT6 265 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CLEC4FQ8N1N0 589 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CBARPQ8N350 705 aaPredicted RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 ARFGAP1Q8N6T3 406 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 RADILQ96JH8 1075 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 CNPY3Q9BT09 278 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 ZNF275Q9NSD4 429 aaPredicted RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 FGFR1OP2Q9NVK5 253 aa12.53□□□□□ -0.4
DDX55-206ENST00000539934 SUCOQ9UBS9 1254 aaKnown RBP12.53□□□□□ -0.4
DDX55-206ENST00000539934 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms