RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NKAPQ8N5F7 415 aaKnown RBP22.27■■□□□ 1.16
HOMER3-204ENST00000539827 PPP2R3CQ969Q6 453 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 CNDP1Q96KN2 507 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 GDF15Q99988 308 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 FAM83CQ9BQN1 747 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 HPS4Q9NQG7 708 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 IL36AQ9UHA7 158 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 COMMD10Q9Y6G5 202 aa22.27■■□□□ 1.16
HOMER3-204ENST00000539827 ZNF106Q9H2Y7 1883 aaKnown RBP22.27■■□□□ 1.16
HOMER3-204ENST00000539827 TRBV5-4A0A0C4DH59 114 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 A0A1W2PQ67 120 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 CFAP73A6NFT4 308 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 CDC7O00311 574 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 ACRV1P26436 265 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 PPARGP37231 505 aaPredicted RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 ADARP55265 1226 aaKnown RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 ST8SIA6P61647 398 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 POLR2LP62875 67 aaKnown RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 UBAP2LQ14157 1087 aaKnown RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 FBXW10Q5XX13 1052 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 PTRHD1Q6GMV3 140 aaKnown RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 ANKRD54Q6NXT1 300 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 TREML1Q86YW5 311 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 CPNE9Q8IYJ1 553 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 EEF1AKMT1Q8WVE0 214 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 KCNJ9Q92806 393 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 SLC7A6OSQ96CW6 309 aaPredicted RBP22.27■■□□□ 1.15
HOMER3-204ENST00000539827 PPP1R36Q96LQ0 422 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 ATOH8Q96SQ7 321 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 TTC1Q99614 292 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 CLPBQ9H078 707 aa22.27■■□□□ 1.15
HOMER3-204ENST00000539827 NPEPPSL1A6NEC2 478 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 GRID2O43424 1007 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 SERPINA6P08185 405 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 TPBGLP0DKB5 382 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 IMPDH1P20839 514 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 KRT72Q14CN4 511 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 TSNQ15631 228 aaKnown RBP22.26■■□□□ 1.15
HOMER3-204ENST00000539827 NAIF1Q69YI7 327 aaPredicted RBP22.26■■□□□ 1.15
HOMER3-204ENST00000539827 BRAT1Q6PJG6 821 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 VITQ6UXI7 678 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 RBFAQ8N0V3 343 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 PTGR2Q8N8N7 351 aaPredicted RBP22.26■■□□□ 1.15
HOMER3-204ENST00000539827 RHEBL1Q8TAI7 183 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 KIAA1191Q96A73 305 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 PTCD3Q96EY7 689 aaKnown RBP22.26■■□□□ 1.15
HOMER3-204ENST00000539827 LINGO1Q96FE5 620 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 ARHGEF3Q9NR81 526 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 THG1LQ9NWX6 298 aaKnown RBP22.26■■□□□ 1.15
HOMER3-204ENST00000539827 GTSE1Q9NYZ3 720 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 DEC1Q9P2X7 70 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 PCDHB1Q9Y5F3 818 aa22.26■■□□□ 1.15
HOMER3-204ENST00000539827 MATN2O00339 956 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TIMP2P16035 220 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CD9P21926 228 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 ATP6V0D1P61421 351 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 FAM91A1Q658Y4 838 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 SFTPA1Q8IWL2 248 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 LKAAEAR1Q8TD35 194 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CCDC106Q9BWC9 280 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TRPV4Q9HBA0 871 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 ZFP14Q9HCL3 533 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CD84Q9UIB8 345 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TSR3Q9UJK0 312 aaKnown RBP22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CDH7Q9ULB5 785 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 RNF112Q9ULX5 631 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TMEM233B4DJY2 109 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 SUPT3HB4E1H0 165 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 SUPT3HO75486 399 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TSPAN12O95859 305 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 RPS3P23396 243 aaKnown RBP eCLIP22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CLCN7P51798 805 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 ARHGEF7Q14155 803 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 GRM2Q14416 872 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 UNC50Q53HI1 259 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 SH2D4BQ5SQS7 431 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 ZNF678Q5SXM1 525 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 LYPLAL1Q5VWZ2 237 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 SEL1L3Q68CR1 1132 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CLDN19Q8N6F1 224 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 STAG3L4Q8TBR4 150 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 TUBB6Q9BUF5 446 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 PLA2G2FQ9BZM2 168 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 ABCG8Q9H221 673 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 GSTO2Q9H4Y5 243 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 OBP2AQ9NY56 170 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 PLA2G4CQ9UP65 541 aa22.25■■□□□ 1.15
HOMER3-204ENST00000539827 CEP290O15078 2479 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 GOLGA8QA0A0J9YX86 632 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 GOLGA8OA6NCC3 632 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 LRRC14BA6NHZ5 514 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 GOLGA8NF8WBI6 632 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 BTN3A1O00481 513 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 NEMP1O14524 444 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 HDAC3O15379 428 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 KERAO60938 352 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 ENO1P06733 434 aaKnown RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 CYP2A6P11509 494 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 HLA-EP13747 358 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 MTHFD2P13995 350 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms