RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 RSL1D1O76021 490 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 GPIP06744 558 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 IDO1P14902 403 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CALRP27797 417 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 GRIA3P42263 894 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CLCN4P51793 760 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CDH13P55290 713 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 NAA20P61599 178 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 PCSK7Q16549 785 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CDKN3Q16667 212 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 FAM117BQ6P1L5 589 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 GPR155Q7Z3F1 870 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 SPATA19Q7Z5L4 167 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 EGFL6Q8IUX8 553 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 BBS5Q8N3I7 341 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 PTGR2Q8N8N7 351 aaPredicted RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 PJA1Q8NG27 643 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ISOC1Q96CN7 298 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 PSKH2Q96QS6 385 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 GMIPQ9P107 970 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 STOML2Q9UJZ1 356 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 MYRFQ9Y2G1 1151 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ACTL7AQ9Y615 435 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 MRPL42Q9Y6G3 142 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 LAMA2P24043 3122 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 ZNF839A8K0R7 811 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TMX2-CTNND1H3BSU7 103 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 VPS4BO75351 444 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ECI2O75521 394 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 SRP72O76094 671 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 ESRRBO95718 433 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TBX18O95935 607 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 FGFR3P22607 806 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CA5AP35218 305 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 NME5P56597 212 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 EML3Q32P44 896 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ZBED5Q49AG3 693 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 KLC3Q6P597 504 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CYP2R1Q6VVX0 501 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ZFAND4Q86XD8 727 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 RASAL3Q86YV0 1011 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TTC30BQ8N4P2 665 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 OR4L1Q8NH43 312 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 HASPINQ8TF76 798 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TRIB2Q92519 343 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TSNARE1Q96NA8 513 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CWH43Q9H720 699 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 USP22Q9UPT9 525 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 DHRS12A0PJE2 317 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 DYTNA2CJ06 578 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 OR7A17O14581 309 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 LSM1O15116 133 aaKnown RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 GREM1O60565 184 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 CYBBP04839 570 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 HTR1AP08908 422 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 GSK3BP49841 420 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 TBX4P57082 545 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 EEFSECP57772 596 aaKnown RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 YWHAHQ04917 246 aaPredicted RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 SLC39A12Q504Y0 691 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 PAQR3Q6TCH7 311 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 CXCL17Q6UXB2 119 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 PRR23BQ6ZRT6 265 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 KDELC2Q7Z4H8 507 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 PIANPQ8IYJ0 282 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 RNF168Q8IYW5 571 aaPredicted RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 MIER2Q8N344 545 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 CBR4Q8N4T8 237 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 SLC43A3Q8NBI5 491 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 ZNF420Q8TAQ5 688 aaPredicted RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 SOCS4Q8WXH5 440 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 FKBP10Q96AY3 582 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 HIC2Q96JB3 615 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 ADI1Q9BV57 179 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 TDRD1Q9BXT4 1180 aaKnown RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 PREBQ9HCU5 417 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
PROM1-219ENST00000539194 ZIM2Q9NZV7 527 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 SNX13Q9Y5W8 968 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 KIAA1549LQ6ZVL6 1849 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 SCN5AQ14524 2016 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 MICAL3Q7RTP6 2002 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 A0A0D9SEW6 157 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 EOMESO95936 686 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 ENO2P09104 434 aaPredicted RBP6.88□□□□□ -1.31
PROM1-219ENST00000539194 UMPSP11172 480 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 ATP6V1B1P15313 513 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 TCF3P15923 654 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 PTPN6P29350 595 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 GRK4P32298 578 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 CDH15P55291 814 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 ECT2LQ008S8 904 aa6.88□□□□□ -1.31
PROM1-219ENST00000539194 PCBP2Q15366 365 aaKnown RBP eCLIP6.88□□□□□ -1.316e-6■■■■□ 21.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms