RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZNF202O95125 648 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CYC1P08574 325 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM86B2P0C5J1 330 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CTAGE8P0CG41 777 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GPD1P21695 349 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HOXD9P28356 352 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 THPOP40225 353 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SKIV2L2P42285 1042 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MTHFRP42898 656 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ALDH3B1P43353 468 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KCNJ1P48048 391 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC9A3P48764 834 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HDAC4P56524 1084 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 STARD6P59095 220 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLC1Q07866 573 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 STXBP2Q15833 593 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ASIC2Q16515 512 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SGO1Q5FBB7 561 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GGNBP1Q5YKI7 109 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RBM44Q6ZP01 1051 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SEPT14Q6ZU15 432 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 C1QL2Q7Z5L3 287 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CTAGE4Q8IX94 777 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM217AQ8IXS0 508 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 C17orf53Q8N3J3 647 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SH3RF3Q8TEJ3 882 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PIGBQ92521 554 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DPF1Q92782 380 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC22A18Q96BI1 424 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PAFAH2Q99487 392 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AGAP2Q99490 1192 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 OLFM1Q99784 485 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CCM2Q9BSQ5 444 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LHPPQ9H008 270 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ZDHHC6Q9H6R6 413 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RCC2Q9P258 522 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EPHA6Q9UF33 1036 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RPS6KA6Q9UK32 745 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 REXO2Q9Y3B8 237 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SRPRBQ9Y5M8 271 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NFS1Q9Y697 457 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF804BA4D1E1 1349 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GPR75-ASB3A0A0A6YYF3 556 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM90A10PA6NDY2 464 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC25A17O43808 307 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBX10O75333 385 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CAMTA2O94983 1202 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NKX2-2O95096 273 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 IPO7O95373 1038 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CLDN7O95471 211 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GCP02774 474 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CCDC175P0C221 793 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CYP2A6P11509 494 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FGF5P12034 268 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 VCLP18206 1134 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DNASE1P24855 282 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AZGP1P25311 298 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CCND2P30279 289 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PIGAP37287 484 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MFAP3P55082 362 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EEFSECP57772 596 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RUNX1T1Q06455 604 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MFGE8Q08431 387 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TROAPQ12815 778 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PPIGQ13427 754 aaKnown RBP eCLIP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FRG1Q14331 258 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NFE2L1Q14494 772 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NEDD9Q14511 834 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HNF4GQ14541 408 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KCNB1Q14721 858 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DAZAP2Q15038 168 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TRIP6Q15654 476 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 EIF2S3LQ2VIR3 472 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SETMARQ53H47 684 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PAPPA-AS1Q5QFB9 102 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MORN5Q5VZ52 161 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KCNV1Q6PIU1 500 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CHST9Q7L1S5 443 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CPLX4Q7Z7G2 160 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM160B2Q86V87 743 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DENND6AQ8IWF6 608 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LRRC57Q8N9N7 239 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GABPB2Q8TAK5 448 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LNX1Q8TBB1 728 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SCFD2Q8WU76 684 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM216AQ8WUB2 273 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CNOT9Q92600 299 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RND1Q92730 232 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CELF1Q92879 486 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 INTS12Q96CB8 462 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KLHL29Q96CT2 875 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SPATA17Q96L03 361 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 KRT12Q99456 494 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NUDT16L1Q9BRJ7 211 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 NTPCRQ9BSD7 190 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PIMREGQ9BSJ6 248 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AP1M1Q9BXS5 423 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ADGRE3Q9BY15 652 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DNAI2Q9GZS0 605 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 VPS33BQ9H267 617 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms