RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 NDUFS3O75489 264 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ASMTLO95671 621 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 BPNT1O95861 308 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 H2AFXP16104 143 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 DDX5P17844 614 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 MMP12P39900 470 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ETV3P41162 512 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 WASP42768 502 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 MAGEA6P43360 314 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 STC1P52823 247 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ADPRHP54922 357 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 BASP1P80723 227 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 DAB2P98082 770 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CD83Q01151 205 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF252P-AS1Q0IIN9 211 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CNTN1Q12860 1018 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 EIF3IQ13347 325 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 MAP7Q14244 749 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 KIR2DS5Q14953 304 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 PTPRNQ16849 979 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ANKRD39Q53RE8 183 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 C2CD6Q53TS8 623 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 RAET1GQ6H3X3 334 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 NIPAL1Q6NVV3 410 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 LRRC8BQ6P9F7 803 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZC3H18Q86VM9 953 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 TRIM48Q8IWZ4 208 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 IPMKQ8NFU5 416 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 HSPA12BQ96MM6 686 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FAM129BQ96TA1 746 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 EFHD1Q9BUP0 239 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FICDQ9BVA6 458 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 MIR1-1HGQ9H1L0 117 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ENAMQ9NRM1 1142 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 RAB6BQ9NRW1 208 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 SMOXQ9NWM0 555 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF212Q9UDV6 495 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 SLCO3A1Q9UIG8 710 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 INTS6Q9UL03 887 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 GPR34Q9UPC5 381 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 STK38LQ9Y2H1 464 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF711Q9Y462 761 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 WASF2Q9Y6W5 498 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 COLEC10Q9Y6Z7 277 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 C1orf232A0A0U1RR37 186 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 A0A1W2PQF6 199 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 EFCAB8A8MWE9 144 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 H3BQF6 201 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 GOLGA8TH3BQL2 631 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 TLR4O00206 839 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 LIN7AO14910 233 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 DIAPH2O60879 1101 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CALCAP01258 141 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 APOA4P06727 396 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 MYZAPP0CAP1 466 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 TROVE2P10155 538 aaKnown RBP eCLIP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 IDO1P14902 403 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 TIMP2P16035 220 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 NFKB1P19838 968 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CR2P20023 1033 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 PLA2G5P39877 138 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 HAAOP46952 286 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 PITX1P78337 314 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 DNAJC3Q13217 504 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 KRT33BQ14525 404 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CA9Q16790 459 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 KLHL38Q2WGJ6 581 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZC3H12BQ5HYM0 836 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FAM209AQ5JX71 171 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FAXCQ5TGI0 409 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 SNX20Q7Z614 316 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 SLC9B2Q86UD5 537 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 C12orf40Q86WS4 652 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF687Q8N1G0 1237 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 DTD2Q96FN9 168 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 HIC2Q96JB3 615 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM74Q96NL1 305 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 NECAB3Q96P71 396 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 OR2M4Q96R27 311 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 COPS8Q99627 209 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 HEMGNQ9BXL5 484 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 CLPBQ9H078 707 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 INTS10Q9NVR2 710 aaKnown RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FKBP14Q9NWM8 211 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 GNPTGQ9UJJ9 305 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.56□□□□□ -1.84
PTPN22-211ENST00000538253 GMEB1Q9Y692 573 aa3.56□□□□□ -1.84
PTPN22-211ENST00000538253 A0A0D9SEW6 157 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GLYATL1P3A0A0U1RQE8 302 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM237BA0A1B0GVD1 139 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LOC285095A0A1B0GVY8 99 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM8BA6NDV4 472 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 A6NJY4 79 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GFRA3O60609 400 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PMPCBO75439 489 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SUPT3HO75486 399 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms