RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PROS1P07225 676 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 OXTRP30559 389 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 MAGEA6P43360 314 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SNRPFP62306 86 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 DGCR6Q14129 220 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ZMYND11Q15326 602 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ASPRV1Q53RT3 343 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PPM1JQ5JR12 505 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 LIPMQ5VYY2 423 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TXNRD3NBQ6F5E7 133 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 DNAJC24Q6P3W2 148 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TMEM81Q6P7N7 255 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM9CQ8IZT9 166 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 OR8H2Q8N162 312 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 C2orf69Q8N8R5 385 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 RDH11Q8TC12 318 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SGTBQ96EQ0 304 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 DYNLL2Q96FJ2 89 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 FEM1AQ9BSK4 669 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SPATA9Q9BWV2 254 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 IL22Q9GZX6 179 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TLR9Q9NR96 1032 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 C1orf112Q9NSG2 853 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 HSPBP1Q9NZL4 362 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 STAP1Q9ULZ2 295 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 LYVE1Q9Y5Y7 322 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CACNA1SQ13698 1873 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 TRAV6A0A075B6T7 132 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 CLRN2A0PK11 232 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 BBIP1A8MTZ0 92 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 AXIN1O15169 862 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 GMDSO60547 372 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 PLA2G6O60733 806 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 APOC1P02654 83 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ALPLP05186 524 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ADORA3P0DMS8 318 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 CD36P16671 472 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 KDELR1P24390 212 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 TIE1P35590 1138 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 GRIA4P48058 902 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 HOXA1P49639 335 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 CD47Q08722 323 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 MRPL28Q13084 256 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ELOAQ14241 798 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 PSMD5Q16401 504 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 RETSATQ6NUM9 610 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ANKS3Q6ZW76 656 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 GPAT4Q86UL3 456 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM35AQ86V20 835 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 GPALPP1Q8IXQ4 340 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ABRAQ8N0Z2 381 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 NIPA2Q8N8Q9 360 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ZMIZ2Q8NF64 920 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 PTP4A1Q93096 173 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ZNF566Q969W8 418 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 SGK3Q96BR1 496 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ACCSQ96QU6 501 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 C12orf57Q99622 126 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 EIF2AK1Q9BQI3 630 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM83DQ9H4H8 585 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 CYP3A43Q9HB55 503 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 NMRAL1Q9HBL8 299 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 INTS7Q9NVH2 962 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM118AQ9NWS6 357 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 USE1Q9NZ43 259 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ZDHHC2Q9UIJ5 367 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 TRAPPC4Q9Y296 219 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 CDK5RAP2Q96SN8 1893 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 FRMPD2Q68DX3 1309 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 UBDO15205 165 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 TLL1O43897 1013 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 LRCH4O75427 683 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 MPOP05164 745 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 SUPT20HL2P0C7V6 817 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC2A3P11169 496 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 MTHFD1P11586 935 aaKnown RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ATP5OP48047 213 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 SSTP61278 116 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 FLI1Q01543 452 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 BTN1A1Q13410 526 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 KCNC3Q14003 757 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 AANATQ16613 207 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 TAZQ16635 292 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 AAK1Q2M2I8 961 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 KLHL12Q53G59 568 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 SETMARQ53H47 684 aaPredicted RBP8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ADGRG3Q86Y34 549 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 RASGRP3Q8IV61 690 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 PELI3Q8N2H9 469 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 MPP5Q8N3R9 675 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 YIPF7Q8N8F6 280 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 ST8SIA4Q92187 359 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 MCEEQ96PE7 176 aa8.48□□□□□ -1.05
SRGAP1-202ENST00000537556 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms